DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB43 and Rab10

DIOPT Version :10

Sequence 1:NP_940892.1 Gene:RAB43 / 339122 HGNCID:19983 Length:212 Species:Homo sapiens
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:172 Identity:79/172 - (45%)
Similarity:121/172 - (70%) Gaps:1/172 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79
            ||.||||:|:||:.|||||::.||...||:....||||:||.:||:|::||::||||||||||||
  Fly     6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 70

Human    80 FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLA 144
            |.|||.||||.|.|.:|.||||...||.::..|:.::.::|..::.::::|||.|:::.|.|:..
  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKE 135

Human   145 EAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGG 186
            ..:::|..:.|. .:|||||.:.|:|.||..:|..::.:..|
  Fly   136 RGEAIAREHGIR-FMETSAKSNINIERAFCELAEAILDKTSG 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB43NP_940892.1 Rab19 16..180 CDD:133267 77/163 (47%)
Effector region. /evidence=ECO:0000250 47..55 4/7 (57%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 77/166 (46%)

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