DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB43 and RabX2

DIOPT Version :10

Sequence 1:NP_940892.1 Gene:RAB43 / 339122 HGNCID:19983 Length:212 Species:Homo sapiens
Sequence 2:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster


Alignment Length:193 Identity:69/193 - (35%)
Similarity:116/193 - (60%) Gaps:13/193 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79
            :|:|||::::||:.|||:|::.||....|:|:...|:|:|...:::|:..:.:.||:|||:|.:|
  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68

Human    80 FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLA 144
            |.::..|.||||:|.:|.||||...||.::..|::::|:.....:..||:|||||....|:||:.
  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133

Human   145 EAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHG-----GPLFSE-------KSPD 195
            :..:.| |...|...|.|||...||.:.|..:|.::..|:.     .|:.||       :|||
  Fly   134 QGFNYA-HRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPD 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB43NP_940892.1 Rab19 16..180 CDD:133267 62/163 (38%)
Effector region. /evidence=ECO:0000250 47..55 2/7 (29%)
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/157 (38%)

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