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Protein Alignment CG9547 and Ivd

DIOPT Version :9

Sequence 1:	NP_609040.1	Gene:	CG9547 / 33911	FlyBaseID:	FBgn0031824	Length:	419	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	420	Identity:	123/420 - (29%)
Similarity:	204/420 - (48%)	Gaps:	42/420 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 RLASTSSKAAAPK-----FNWQDPLNLESQLTEEEVAIRDAFRGYCQAELQPRVKMANRLETFD- 74
            ||..:.|..|.|:     ....|.:|   .|.||:..:|.....:.|..|.|:.:..::...|.
Mouse    16 RLRPSPSPLAVPRRAHSILPVDDDIN---GLNEEQKQLRHTISKFLQENLAPKAQEIDQTNDFKN 77

  Fly    75 -KKIMEEIGSLGVLGCTIK-GYGCAGVSSVAYGLLTREVERVDSAYRSAVSVQSSLAMGAIYDFG 137
             ::..:::|||||||.|.. .||.:|:..:.:.|:..|:.|...|...:....|:|.:..|...|
Mouse    78 LREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNG 142

  Fly   138 SEEQKQRYLPSMAEGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIADV 202
            :|.||::|||.:..|:.|||..::|||.|||...|:.:|  :.|...|:|||:|.|||:.|.||:
Mouse   143 NEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKA--EKKGDHYVLNGNKFWITNGPDADI 205

  Fly   203 IVVWAKCEDGKV---RG---FLVDRKISGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLP 261
            :||:||.:...|   ||   |:|::.:  .|..|.|...|..:|.|.|..::.::.:||...:|.
Mouse   206 LVVYAKTDLTAVPASRGITAFIVEKGM--PGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLS 268

  Fly   262 NVA-GFSGPFSCLNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITE 325
            ..: |.....|.|:..|..:|.|.||..:..::....|...|:.||:.:...||:|.|:||..|.
Mouse   269 QESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333

  Fly   326 IALGLQACLHVGRLKDQKLHTPDMISLLKRNNTGKSL---DIARQMR----DMLGANGISDEYHV 383
            :....|...:|.:..|:.       .::.::..|..|   :.|.|:.    ..||.||..:::.:
Mouse   334 LMASRQYVYNVAKACDEG-------HIIPKDCAGVILYAAECATQVALDGIQCLGGNGYINDFPM 391

  Fly   384 IRHVINLESVNTYE---GTHDIHALILGRA 410
            .|.   |.....||   ||.::..|::|||
Mouse   392 GRF---LRDAKLYEIGAGTSEVRRLVIGRA 418

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.