DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9547 and gcdh

DIOPT Version :10

Sequence 1:NP_609040.1 Gene:CG9547 / 33911 FlyBaseID:FBgn0031824 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_012808612.1 Gene:gcdh / 549043 XenbaseID:XB-GENE-1016447 Length:484 Species:Xenopus tropicalis


Alignment Length:415 Identity:291/415 - (70%)
Similarity:343/415 - (82%) Gaps:3/415 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AQSVISKLRPCARRLASTSSKAAAPKFNWQDPLNLESQLTEEEVAIRDAFRGYCQAELQPRVKMA 67
            ||...:|.:....:....|||:.. :|::||.|:|:|||||:|:.|||:||.|||.:|.||:.||
 Frog    69 AQGTAAKQKDIQAQHEKKSSKSRV-QFDYQDALSLDSQLTEDEIMIRDSFRAYCQEKLMPRILMA 132

  Fly    68 NRLETFDKKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREVERVDSAYRSAVSVQSSLAMGA 132
            ||.|.|::.|:.|:|.|||||.|||||||||.|.||||||.||||||||:|||.:||||||.|..
 Frog   133 NRKEVFERDIISEMGELGVLGSTIKGYGCAGTSYVAYGLLAREVERVDSSYRSVMSVQSSLVMHP 197

  Fly   133 IYDFGSEEQKQRYLPSMAEGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSA 197
            |..:|||||||:|||.:|.|:.:|.|||||||||||||||||||:|:..||||.|||:|||||::
 Frog   198 IAAYGSEEQKQKYLPRLASGEWLGCFGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKTWITNS 262

  Fly   198 PIADVIVVWAKCEDGKVRGFLVDRKISGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPN 262
            ||||:.||||.||||||||||::|  ..|||.|||||||||||||.|||||:::|.:|||.||||
 Frog   263 PIADLCVVWAICEDGKVRGFLIER--GTKGLSTPKIEGKFSLRASATGMILLEDVEIPEENLLPN 325

  Fly   263 VAGFSGPFSCLNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIA 327
            |:|..|||.|||||||||:||||||||.|...||||||||.|||.|||.||||||||||.:|:|.
 Frog   326 VSGLGGPFGCLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLTDIT 390

  Fly   328 LGLQACLHVGRLKDQKLHTPDMISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIRHVINLES 392
            :||||||.:|||||::..||:|||:||||:.||:||||||.|||||.||||||||:||||:||||
 Frog   391 IGLQACLRLGRLKDEEKATPEMISMLKRNSCGKALDIARQARDMLGGNGISDEYHIIRHVMNLES 455

  Fly   393 VNTYEGTHDIHALILGRAITGLAAF 417
            |||||||||:||||||||||||.||
 Frog   456 VNTYEGTHDVHALILGRAITGLQAF 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9547NP_609040.1 GCD 29..417 CDD:173840 283/387 (73%)
gcdhXP_012808612.1 GCD 94..480 CDD:173840 283/387 (73%)

Return to query results.
Submit another query.