DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9547 and gcdhb

DIOPT Version :10

Sequence 1:NP_609040.1 Gene:CG9547 / 33911 FlyBaseID:FBgn0031824 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001429839.1 Gene:gcdhb / 450003 ZFINID:ZDB-GENE-041010-117 Length:440 Species:Danio rerio


Alignment Length:433 Identity:287/433 - (66%)
Similarity:338/433 - (78%) Gaps:20/433 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AQSVISKLRPCARRLASTSSKAA----------------APK--FNWQDPLNLESQLTEEEVAIR 49
            |..::...:.|....|..|.|.|                |||  |||:|.|:||..|||||:.||
Zfish     6 ASRLLVNSQRCVLFTACRSQKTATSPWDAEKSGEKKQMKAPKVQFNWRDALDLEGLLTEEEIMIR 70

  Fly    50 DAFRGYCQAELQPRVKMANRLETFDKKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREVERV 114
            |:||.|||.:|.||:.||||.|.|.::|:.|:|.|||||.|||||||||.|.|||||:.||||||
Zfish    71 DSFRTYCQEKLMPRILMANRNEIFHREIVSEMGELGVLGPTIKGYGCAGTSYVAYGLIAREVERV 135

  Fly   115 DSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLPSMAEGKLIGAFGLTEPNHGSDPAGMETRAKYD 179
            ||.|||.:||||||.|..|..:|:|||||:|||.:|:|:::|.||||||||||||..|||:|||:
Zfish   136 DSGYRSVMSVQSSLVMHPINAYGTEEQKQKYLPRLAQGEILGCFGLTEPNHGSDPGSMETKAKYN 200

  Fly   180 SKSKTYILNGSKTWITSAPIADVIVVWAKCEDGKVRGFLVDRKISGKGLETPKIEGKFSLRASPT 244
            |.|:|:.|.|||||||::|:||:.||||||||||||||:::|.:  |||.|||||||||||||.|
Zfish   201 SSSRTFTLTGSKTWITNSPVADICVVWAKCEDGKVRGFILERGM--KGLSTPKIEGKFSLRASAT 263

  Fly   245 GMILMDEVRVPEEQLLPNVAGFSGPFSCLNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPL 309
            |||:||||.||||.|||..:|.:|||.||||||||||||||||||.|....|||||||.|||.||
Zfish   264 GMIIMDEVEVPEENLLPKASGLAGPFGCLNNARYGIAWGALGAAEFCFHATRQYTLDRIQFGVPL 328

  Fly   310 AANQLIQKKLADAITEIALGLQACLHVGRLKDQKLHTPDMISLLKRNNTGKSLDIARQMRDMLGA 374
            |.|||:|||:||.:|||.||||:||.:|||.|.|...|:||||||||:.||:||||||.|||||.
Zfish   329 ARNQLMQKKMADMLTEITLGLQSCLQLGRLIDDKKAAPEMISLLKRNSCGKALDIARQARDMLGG 393

  Fly   375 NGISDEYHVIRHVINLESVNTYEGTHDIHALILGRAITGLAAF 417
            |||:||||:||||:|||:||||||||||||||||||||||.:|
Zfish   394 NGIADEYHIIRHVLNLEAVNTYEGTHDIHALILGRAITGLQSF 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9547NP_609040.1 GCD 29..417 CDD:173840 277/387 (72%)
gcdhbNP_001429839.1 None

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