DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9547 and gcdha

DIOPT Version :9

Sequence 1:NP_609040.1 Gene:CG9547 / 33911 FlyBaseID:FBgn0031824 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_957180.1 Gene:gcdha / 393860 ZFINID:ZDB-GENE-040426-1855 Length:441 Species:Danio rerio


Alignment Length:414 Identity:287/414 - (69%)
Similarity:343/414 - (82%) Gaps:11/414 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LRPCA----RRLASTSSKAAAPK--FNWQDPLNLESQLTEEEVAIRDAFRGYCQAELQPRVKMAN 68
            |.|.|    .|:..||.:   ||  |:|:|.|:||.||||||:.|||:||.||:.:|.||:.|||
Zfish    29 LAPAAYDKEERIKKTSKQ---PKVTFDWRDALDLEGQLTEEEIMIRDSFRTYCEDKLMPRIIMAN 90

  Fly    69 RLETFDKKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREVERVDSAYRSAVSVQSSLAMGAI 133
            |.|.|.::|:.|:|.|||||.||:||||||.|.|||||:.||||||||.|||.:||||||.|..|
Zfish    91 RNEHFHREILNEMGELGVLGPTIQGYGCAGTSYVAYGLIAREVERVDSGYRSVMSVQSSLVMHPI 155

  Fly   134 YDFGSEEQKQRYLPSMAEGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAP 198
            ..:|:|||||:|||.:|.|:::|.|||||||||||||||||:|||:..|:||.::|:|||||::|
Zfish   156 NAYGTEEQKQKYLPKLARGEILGCFGLTEPNHGSDPAGMETKAKYNPSSRTYSISGTKTWITNSP 220

  Fly   199 IADVIVVWAKCEDGKVRGFLVDRKISGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNV 263
            .||:.||||||||||||||:::|.:  |||.|||||||||||||.||||:||||.||||.|||:|
Zfish   221 YADICVVWAKCEDGKVRGFVLERGM--KGLSTPKIEGKFSLRASATGMIVMDEVEVPEENLLPHV 283

  Fly   264 AGFSGPFSCLNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIAL 328
            :|.:|||.||||||:|||||||||||.|...|||||:||.|||.|||.|||||||:||.:|||.:
Zfish   284 SGLAGPFGCLNNARFGIAWGALGAAEFCFHAARQYTMDRIQFGVPLARNQLIQKKMADMLTEITI 348

  Fly   329 GLQACLHVGRLKDQKLHTPDMISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIRHVINLESV 393
            |||:||.:|||.|||.|||:||||||||:.||:||||||.|||||.|||:||||:||||:|||:|
Zfish   349 GLQSCLQLGRLIDQKKHTPEMISLLKRNSCGKALDIARQARDMLGGNGIADEYHIIRHVMNLEAV 413

  Fly   394 NTYEGTHDIHALILGRAITGLAAF 417
            |||||||||||||||||||||.:|
Zfish   414 NTYEGTHDIHALILGRAITGLQSF 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9547NP_609040.1 GCD 29..417 CDD:173840 278/387 (72%)
CaiA 41..417 CDD:224871 271/375 (72%)
gcdhaNP_957180.1 GCD 51..437 CDD:173840 278/387 (72%)
CaiA 63..437 CDD:224871 271/375 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576418
Domainoid 1 1.000 234 1.000 Domainoid score I2321
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130
Inparanoid 1 1.050 581 1.000 Inparanoid score I988
OMA 1 1.010 - - QHG61728
OrthoDB 1 1.010 - - D275334at33208
OrthoFinder 1 1.000 - - FOG0005817
OrthoInspector 1 1.000 - - otm25694
orthoMCL 1 0.900 - - OOG6_101810
Panther 1 1.100 - - LDO PTHR42807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2538
SonicParanoid 1 1.000 - - X4208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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