DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9547 and Gcdh

DIOPT Version :9

Sequence 1:NP_609040.1 Gene:CG9547 / 33911 FlyBaseID:FBgn0031824 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001038209.2 Gene:Gcdh / 270076 MGIID:104541 Length:447 Species:Mus musculus


Alignment Length:410 Identity:270/410 - (65%)
Similarity:331/410 - (80%) Gaps:11/410 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SKLRPCARRLASTSSKAAAPKFNWQDPLNLESQLTEEEVAIRDAFRGYCQAELQPRVKMANRLET 72
            :::||         :|::.|.|:|:|||.||.|||.:|..|||.||.|||..|..|:.:|||.|.
Mouse    45 TQIRP---------AKSSRPVFDWKDPLILEEQLTADEKLIRDTFRNYCQERLMSRILLANRNEV 100

  Fly    73 FDKKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREVERVDSAYRSAVSVQSSLAMGAIYDFG 137
            |.:.|:.|:|.|||||.|||||||||||||||||||||:|||||.|||.:||||||.|..||.:|
Mouse   101 FHRDIVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYG 165

  Fly   138 SEEQKQRYLPSMAEGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIADV 202
            ||||:|:|||.:|:|:|:|.||||||||||||.||||||:::..:::|.|:|:|||||::|:||:
Mouse   166 SEEQRQKYLPGLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADL 230

  Fly   203 IVVWAKCEDGKVRGFLVDRKISGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVAGFS 267
            .:|||:|||..:|||::::.:  :||..|:||||||||||.||||:||.|.||||.:||||:..:
Mouse   231 FIVWARCEDNCIRGFILEKGM--RGLSAPRIEGKFSLRASATGMIIMDSVEVPEENVLPNVSSLA 293

  Fly   268 GPFSCLNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGLQA 332
            |||.|||.|||||.||.|||||.|:..||||.|||.|||.|||.|||:||||||.:|||.|||.|
Mouse   294 GPFGCLNTARYGITWGVLGAAEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHA 358

  Fly   333 CLHVGRLKDQKLHTPDMISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIRHVINLESVNTYE 397
            ||.:||||||...||:|:|:|||||.||:||||||.||:||.||||||||||||.:|||:|||||
Mouse   359 CLQLGRLKDQDKATPEMVSMLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYE 423

  Fly   398 GTHDIHALILGRAITGLAAF 417
            ||||||||||||||||:.||
Mouse   424 GTHDIHALILGRAITGIQAF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9547NP_609040.1 GCD 29..417 CDD:173840 264/387 (68%)
CaiA 41..417 CDD:224871 256/375 (68%)
GcdhNP_001038209.2 GCD 57..443 CDD:173840 264/387 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833706
Domainoid 1 1.000 224 1.000 Domainoid score I2558
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130
Inparanoid 1 1.050 561 1.000 Inparanoid score I1086
Isobase 1 0.950 - 0 Normalized mean entropy S2100
OMA 1 1.010 - - QHG61728
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0005817
OrthoInspector 1 1.000 - - oto92262
orthoMCL 1 0.900 - - OOG6_101810
Panther 1 1.100 - - LDO PTHR42807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2538
SonicParanoid 1 1.000 - - X4208
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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