DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9547 and acdh-2

DIOPT Version :9

Sequence 1:NP_609040.1 Gene:CG9547 / 33911 FlyBaseID:FBgn0031824 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001343623.1 Gene:acdh-2 / 173940 WormBaseID:WBGene00015894 Length:386 Species:Caenorhabditis elegans


Alignment Length:399 Identity:104/399 - (26%)
Similarity:178/399 - (44%) Gaps:43/399 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 STSSKAAAPKFNWQDPLNLESQLTEEEVAIRDAFRGYCQAELQPRVKMANRLETFDKKIMEEIGS 83
            ||:...:|.:.....||   ..|.|.|..:.:..:.:.|:.::|.|:..:|....:|:::::...
 Worm    17 STTGSISAQQQPRVFPL---QHLNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFD 78

  Fly    84 LGVLGCTI-KGYGCAGVSSVAYGLLTREVERVDSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLP 147
            |.::|..| ..||.:|||.....|...|:.::|.|....:.:|::|....|.:||:||.|::||.
 Worm    79 LKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLK 143

  Fly   148 SMAEGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIADVIVVWAKCEDG 212
            .:.:.. :|||.|:|...|||...|:|.||.|...  :||||||..|::|||||..:|.|..:..
 Worm   144 KLCKDS-VGAFALSEVVSGSDAFAMQTVAKKDGDH--FILNGSKWGISNAPIADFFLVLANADPE 205

  Fly   213 K-VRG---FLVDRKISGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVA-GFSGPFSC 272
            | .||   |:|||  ..:|:...:.:....:||.....:.::.||||:..::.... |:......
 Worm   206 KGYRGVTCFIVDR--DHEGVVLGEQDDNLGMRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEV 268

  Fly   273 LNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGLQACLHVG 337
            ||.:|.     .:||                |.|        :|.::|...|||........:..
 Worm   269 LNASRI-----VIGA----------------QMG--------LQHQIAKIQTEIEAARLMVYNCA 304

  Fly   338 RLKDQKLHTPDMISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIRHVINLESVNTYEGTHDI 402
            |:||..:......|:.|......:....:|..:.||..|.:..:...:...:......||||.:|
 Worm   305 RMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLGGVGFTKNFMAEKFYRDAVVGGIYEGTSNI 369

  Fly   403 HALILGRAI 411
            ....:.:.|
 Worm   370 QLNTIAKFI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9547NP_609040.1 GCD 29..417 CDD:173840 101/389 (26%)
CaiA 41..417 CDD:224871 99/377 (26%)
acdh-2NP_001343623.1 ACAD 38..379 CDD:324545 98/375 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.