DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31638 and Myo28B1

DIOPT Version :10

Sequence 1:NP_723186.2 Gene:CG31638 / 33910 FlyBaseID:FBgn0051638 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster


Alignment Length:552 Identity:107/552 - (19%)
Similarity:188/552 - (34%) Gaps:172/552 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RYGETEWEARESQRQRE-LHEARARAAQMEKTMKW-WSDCTA----------NWREKWSKVRNER 89
            ||.....:.|:.|..|: .|...|..|..:.|.|: ...|..          ..|:.:.|...||
  Fly   773 RYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDFQKKLLER 837

  Fly    90 NKAREESKQLSLKLDGVMKEAHSL-------------KREKNDLELQITQ--------------- 126
            .|..:..|:..||| ..||||..|             :||:.:..||..|               
  Fly   838 RKQNQLKKEELLKL-AKMKEAEELLRLQQLKEQKEREQREQQEKRLQEEQRLKAEAAARNALAMA 901

  Fly   127 ----------LKKEMEKVHTLMMKH-------------------AGQFHRADT------SEDAEA 156
                      :|:|..|..||..::                   |....|.:|      :.|.|:
  Fly   902 AVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVTRINTIPESPGTIDVES 966

  Fly   157 NG-------RDANCSPDISSDGLKNINSEDGLVTKLPNDV-KDLDIEEFA--------------- 198
            :.       |..|..||.:...|.||:|.|.:  :||..| .::|..:|:               
  Fly   967 SKQMVDDVFRFLNDEPDAALRKLNNISSGDTI--RLPKSVPNNIDTSDFSYLKYAATYFGGGATA 1029

  Fly   199 ------MKGAMPKHLTELDEAAA-----------AEEKRLIQQLSKDDFDEDYLLQKISMLQLRL 246
                  :|.::.||...:||.|:           .:...::...:...||.:.|:..::.| |..
  Fly  1030 QHERKPLKKSLLKHEHPIDEMASKAIWLTILRFMGDLPDVVSSPTLHVFDNENLMSDLASL-LNT 1093

  Fly   247 DEAQKTLQAERDEKLELHKSIEKLTLEIQDVRGRQEEMRSAKQEAVRELLTLQEQHRAEMR---- 307
            .::.|.....|..:..:.|.:         ..|.:|     .||..:..|.:...|..::.    
  Fly  1094 SDSYKPRLFVRQSQRRIPKPL---------ASGEKE-----AQEFYQHWLNVPTSHLEKIHFIIG 1144

  Fly   308 --IVNNSLQEEIAARENLERRLTELRTELEHLQAENASEWGKRERLESEKLAMERDNKKLRAELR 370
              |:.|||::||.|:...:..|...|           |.:.:...|.|..|:....:|:....||
  Fly  1145 HGIIKNSLRDEILAQICKQLYLNPSR-----------SSYSRGWLLLSLCLSCFPPSKEFEPHLR 1198

  Fly   371 DYQERSDRKCRPMQANDVELRALQQELSERNKEISEVKMSHAKLKKLLAETNTELGHAVRRAEQY 435
            .:.::...:   :||.. .|:.|::.|      ::..:.....|.:|         ||:|.....
  Fly  1199 SFMKQGTAQ---LQATP-SLQRLERTL------VNGPRCQPPSLFEL---------HAIRGRHPL 1244

  Fly   436 EAEVKRLRQRVEELKRELAGAEDELDSAVNQV 467
            ..::..:..:...|:.:.|....|   ||||:
  Fly  1245 RLDIHLMDGQQRRLQVDAASTARE---AVNQL 1273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31638NP_723186.2 Smc <233..>496 CDD:440809 45/241 (19%)
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832
IQ 765..785 CDD:197470 3/11 (27%)
Atrophin-1 <820..>946 CDD:460830 24/126 (19%)
MyTH4 1031..1239 CDD:470587 45/252 (18%)
FERM1_F1_Myosin-VII 1243..1334 CDD:340612 7/34 (21%)
B41 1248..1429 CDD:214604 7/29 (24%)
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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