DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31638 and Mhcl

DIOPT Version :9

Sequence 1:NP_723186.2 Gene:CG31638 / 33910 FlyBaseID:FBgn0051638 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster


Alignment Length:754 Identity:160/754 - (21%)
Similarity:284/754 - (37%) Gaps:194/754 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RNEVGGV----------GVIGTTMSARY----GETEWEAR--ESQRQRELHEARARAAQMEKTMK 69
            ::::.|:          ||.|.....:|    .|.|:..|  .:|.:.:|.:..|....:|..: 
  Fly  1483 KSDLNGISEDEDAENEDGVGGGVYKLKYERVARELEFTKRRLHTQHEHDLEQLVALKKHLEMKL- 1546

  Fly    70 WWSDC----------TANWREKWSKVRNERNKARE------------ESKQ-------LSLKLDG 105
              ||.          ...|:.|..|:.||.|..|.            |.||       .||: |.
  Fly  1547 --SDAYEEVVEQRQVVGQWKRKAQKMTNEMNDLRMLLEEQNARNNLLEKKQRKFDAECQSLQ-DA 1608

  Fly   106 VMKEAHSLK---REKNDLELQITQLKKEMEKVHTLMMKHAGQFHRADTSEDAEANGRDANCSPDI 167
            |.:|..:.:   |||:.|:.:...|::.:                |||..|.|           .
  Fly  1609 VRQERQAKERYGREKDVLQAEKFTLEQTL----------------ADTRLDLE-----------F 1646

  Fly   168 SSDGLKNINSEDGLVTKLPNDVKDLDIEEFAMKGAMPKHLTELDEAAAAEEKRLIQQLSKDDFDE 232
            ..:.|.::..|               :||....|...:...:|..:....|:|..:|  :::.||
  Fly  1647 KEEKLASLQRE---------------LEEMTFGGGTEEEFAQLRRSKNETERRAKEQ--EEELDE 1694

  Fly   233 DYLLQKISMLQ---LRLDEAQKTLQAE-------RDEKLEL-----HKSIEKLTLEIQDVRGRQE 282
              :..:|.:|:   |||:...:|::.|       |||:||.     :|.|:.|..:::.....:.
  Fly  1695 --MAGQIQLLEQAKLRLEMTLETMRKEARRESQQRDEELEEVRGNGYKKIKALECQLETEHEERT 1757

  Fly   283 EMRSAKQEAVRELLTLQEQHRAEM---RIVNNSLQEEIAARENLERRLTELRTELEHLQAENASE 344
            .:...|.|..|.|.:::::.|.:.   ..:|..|:.::...:.|   |.:.:|:||.|:|:..  
  Fly  1758 LLLREKHELERRLSSMEDRDRVDRDAEEALNQKLRRDLRKYKAL---LKDAQTQLERLKADTP-- 1817

  Fly   345 WGK------RERLE----SEKLAMERDNKKLRAELRDYQERSDRKCRPMQANDVELRA------- 392
             ||      |.:||    :..||| :..:...|||.:.|...|...|  ..||.|.||       
  Fly  1818 -GKTLIRQLRNQLEDAESARSLAM-KARQTAEAELTEVQAMFDESHR--ARNDAEERANAAHRDR 1878

  Fly   393 --LQQELSERNKEISEVKMSHAKLKKLLAETNTELGHAVRRAEQYEAEVKRLRQRVEELKRELAG 455
              ||.::.|..:|:.|:...::...|.|......:..|..:..:.|||...|:::|.||:..|..
  Fly  1879 AELQAQIEENEEELGELMKKYSATVKQLNTEQINVSEAEFKLNEMEAERNNLKEQVAELQHRLDN 1943

  Fly   456 AEDELDSAVNQV-RRLQRSNDELVGQTE-------GLQVQI-------QHLQNRRAPSPQLRGMG 505
            .|:..|.::..: :||:....||..:.|       .|:||:       :.|||....|       
  Fly  1944 VENLGDPSMAMMSKRLELRTKELESRLELEQATRARLEVQVNRHKEALEKLQNEVTQS------- 2001

  Fly   506 GVQLRNKIAVELPNDCLPNINDLRQIFDDSQAGLRSSHNGSDAAMHHAASVKRSSHTERTLLQQQ 570
              ::|...|.::......::.|:|:.|                  |..:|.::.|.|.|..|:::
  Fly  2002 --KMREMQAQDVIKKSQKSLRDMREEF------------------HAVSSREQESLTRRKDLEKK 2046

  Fly   571 QSSAAASAAA-------AAAAAAAFFDAKPTHLEENIFESKSRNLEFERAKQKFDNPHGQHHHHH 628
            .....:..||       |....|....|.....||.:.|| ..:|....:....::.....|...
  Fly  2047 VEQMESEGAALKNDLRLALQRIADLQQAMEEEGEEELSES-DESLSSVGSISDLEDRLRPVHVKR 2110

  Fly   629 QRQRSGNGRYGSAGSSASRANLALPLKGTTNGGSSSVSS 667
            ..|:|.||..|..|.|...:...:..:...|....:|:|
  Fly  2111 SSQQSLNGSIGGGGGSVVSSTRTVVFEKDDNSPRITVTS 2149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31638NP_723186.2 DUF4201 284..457 CDD:290581 49/194 (25%)
Ax_dynein_light <300..369 CDD:287215 19/81 (23%)
RILP-like <312..448 CDD:304877 40/154 (26%)
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492
MYSc 556..1317 CDD:214580
MYSc_Myo18 575..1305 CDD:276837
GBP_C <1540..1750 CDD:303769 54/259 (21%)
COG1340 1565..1833 CDD:224259 69/320 (22%)
coiled coil 1723..1734 CDD:293879 5/10 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466250
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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