DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31638 and Ccdc102a

DIOPT Version :9

Sequence 1:NP_723186.2 Gene:CG31638 / 33910 FlyBaseID:FBgn0051638 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001101907.1 Gene:Ccdc102a / 361363 RGDID:1308684 Length:549 Species:Rattus norvegicus


Alignment Length:499 Identity:213/499 - (42%)
Similarity:299/499 - (59%) Gaps:43/499 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TTQSVTAAPAGGSRRNEVGGVGVIGTTMSARYGETEWEARESQRQRELHEARARAAQMEKTMKWW 71
            |..|.|.:|         |....:..|..|...:.:||:||..|.|||.||||||.||||||:||
  Rat    41 TPPSGTPSP---------GPPPTLPLTAPALLADGDWESREELRLRELEEARARALQMEKTMRWW 96

  Fly    72 SDCTANWREKWSKVRNERNKAREESKQLSLKLDGVMKEAHSLKREKNDLELQITQLKKEMEKVHT 136
            |||||||||||||||.|||:||||.:||..:||.:.||....:||:.:.:.:.....:|:.::. 
  Rat    97 SDCTANWREKWSKVRAERNRAREEVRQLRQRLDTLTKELAGARRERQEAQGECEARGRELARLR- 160

  Fly   137 LMMKHAGQFHRADTSEDAEANGRDANCSPDIS---SDGLKNINSEDGLVTKLPNDVK-DLDIEEF 197
                  |....||.:.:.....|:.....||.   |.|.:.::..:.|:...|.::: ..|....
  Rat   161 ------GARGAADKTHEGPEAEREHEPVRDIGAERSPGSQELDLVESLLKSRPEELEGSWDACSV 219

  Fly   198 A------MKGAMPKHLTELDEAAAAEEKRLIQQLSKDDFDEDYLLQKISMLQLRLDEAQKTLQAE 256
            |      ..|...::....::.|..||.                ..|::.|:|||||:||.|..|
  Rat   220 AAGGSRVSSGRQDRNRLPWEDTAGTEED----------------TSKLTALRLRLDESQKVLLKE 268

  Fly   257 RDEKLELHKSIEKLTLEIQDVRGRQEEMRSAKQEAVRELLTLQEQHRAEMRIVNNSLQEEIAARE 321
            |::||.|.|:||||..|:...:.:.||:...|||.:::|..|:|.|:.|:..::..|::|:.||.
  Rat   269 REDKLALSKNIEKLEGELSQWKIKYEELSKTKQEMLKQLSILKETHQDELGRMSEDLEDELGARS 333

  Fly   322 NLERRLTELRTELEHLQAENASEWGKRERLESEKLAMERDNKKLRAELRDYQERSDRKCRP-MQA 385
            :::|::.|||.|:|.||||||:|||:|||||:|||.:||:||||||::.|.:|...|:.|. ..|
  Rat   334 SMDRKMAELRGEMERLQAENAAEWGRRERLETEKLGLERENKKLRAQVGDLEEALARRRRQNASA 398

  Fly   386 NDVELRALQQELSERNKEISEVKMSHAKLKKLLAETNTELGHAVRRAEQYEAEVKRLRQRVEELK 450
            .|.:|||.|..|.|:|||::::|..|:||||...|...||.||.||.||:|.|||:||.||||||
  Rat   399 LDCDLRASQAALFEKNKELADLKHVHSKLKKQFQEKVAELAHANRRVEQHETEVKKLRLRVEELK 463

  Fly   451 RELAGAEDELDSAVNQVRRLQRSNDELVGQTEGLQVQIQHLQNR 494
            :|||.||||||.|.||.|:||||.||...|:|.||||::|||:|
  Rat   464 KELAQAEDELDEAHNQARKLQRSLDEQTEQSENLQVQLEHLQSR 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31638NP_723186.2 DUF4201 284..457 CDD:290581 88/173 (51%)
Ax_dynein_light <300..369 CDD:287215 38/68 (56%)
RILP-like <312..448 CDD:304877 73/136 (54%)
Ccdc102aNP_001101907.1 DUF881 104..>228 CDD:303034 36/130 (28%)
HMMR_N 212..529 CDD:292527 143/312 (46%)
FAM76 <381..464 CDD:292665 41/82 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 205 1.000 Domainoid score I2842
eggNOG 1 0.900 - - E1_28K4K
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13240
Inparanoid 1 1.050 361 1.000 Inparanoid score I2135
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1304833at2759
OrthoFinder 1 1.000 - - FOG0005832
OrthoInspector 1 1.000 - - oto96264
orthoMCL 1 0.900 - - OOG6_108934
Panther 1 1.100 - - LDO PTHR46292
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5576
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

Return to query results.
Submit another query.