DRSC/TRiP Functional Genomics Resources

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Protein Alignment epsilonCOP and AT1G30630

DIOPT Version :9

Sequence 1:NP_609037.1 Gene:epsilonCOP / 33908 FlyBaseID:FBgn0027496 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_174351.1 Gene:AT1G30630 / 839943 AraportID:AT1G30630 Length:292 Species:Arabidopsis thaliana


Alignment Length:282 Identity:93/282 - (32%)
Similarity:157/282 - (55%) Gaps:10/282 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LFDARNEYYIGNFMGSINFV----LPEQGTAGPELLSYMYLSYLAIDSGRIVASDIKEGNSTPLQ 74
            ||:.||.:|:|.:..:||..    |.::.....:.|  ::.:|:|:.|.::|.|:|.|..:||||
plant    10 LFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCL--VHRAYIALGSYQLVISEIDEAAATPLQ 72

  Fly    75 ALRLVHEAFEQPSRTEELLEKLTDKVAGEEDETN-IWHLATAIVYCHDGQFENALKILHGSTNLE 138
            |::|:......|...|..:..|.:.:|......| |..|....::.|:..:..|||..|....::
plant    73 AVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHTHSGGTMD 137

  Fly   139 SMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFCEKF 203
            ..||:||..:::.|.|.|::.:..||:|.:|.||||||.||:.||.|..::|:|:.|:|:|.||:
plant   138 LHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKY 202

  Fly   204 KPTPALLNGQAVVHLGLERYEEADSVLRESLLKKHNDYDTLINLMVHAHLTGKPTEAITRNLEQL 268
            ..|..:|||:||..:.:..:|||:::|.|:|.|...|.:||.||:|.:...||.:   :|.|.||
plant   203 PMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLVVCSLHVGKSS---SRYLNQL 264

  Fly   269 RQFYPKSDFVTDLDKKSAEFDR 290
            :..:|:...|.........|:|
plant   265 KLSHPEHVLVKRAASAEDNFER 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
epsilonCOPNP_609037.1 Coatomer_E 12..296 CDD:252768 93/282 (33%)
TPR repeat 175..201 CDD:276809 12/25 (48%)
TPR repeat 206..236 CDD:276809 12/29 (41%)
AT1G30630NP_174351.1 Coatomer_E 8..292 CDD:398419 93/282 (33%)
TPR repeat 175..200 CDD:276809 11/24 (46%)
TPR repeat 205..235 CDD:276809 12/29 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1391
eggNOG 1 0.900 - - E1_KOG3081
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5254
Inparanoid 1 1.050 151 1.000 Inparanoid score I1705
OMA 1 1.010 - - QHG54590
OrthoDB 1 1.010 - - D1161199at2759
OrthoFinder 1 1.000 - - FOG0004888
OrthoInspector 1 1.000 - - otm3152
orthoMCL 1 0.900 - - OOG6_102500
Panther 1 1.100 - - O PTHR10805
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4002
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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