Protein Alignment epsilonCOP and sec28

DIOPT Version :10

• Sequence 1: NP_609037.1
• Gene: epsilonCOP / 33908
• FlyBaseID: FBgn0027496
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_595959.1
• Gene: sec28 / 2540317
• PomBaseID: SPBC24C6.05
• Length: 288
• Species: Schizosaccharomyces pombe
• Alignment Length: 295
• Identity: 79/295 - (26%)
• Similarity: 133/295 - (45%)
• Gaps: 21/295 - (7%)

  Fly     7 EEDTNSVLFDARNEYYIGNFMGSINFVLPEQGTAGPELLS-YMYLSYLAI-DSGRIVASDIKEGN 69
            |...::.|:..|..:|.||:..............|.||.. ||..:.||: :|...:.|.:.:
pombe     5 EASLSNELYFVRQYFYSGNYTKLFEIDTTSMSEKGLELTEIYMARAKLALGESLESIQSILTQ-- 67

  Fly    70 STPLQALRLVHEAFEQPSRTEELLEKLTDKVAGEEDETNIWHLATAIVYCHDGQFENALKILHGS 134
            .||..|..|....       |..:|.:.|: .|..|  ::.....||....:|.|::|:.:|..|
pombe    68 KTPGSAAILALAG-------EGNMELIIDQ-HGNSD--SVVQTLGAIFQIKNGSFDDAMDLLKKS 122

  Fly   135 T-NLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLAQAWVALAQ-GTEQMQDAFHIYQ 197
            . |||::||.|...||..:::.|:|.:.:..:.:|:..:.||||:|:.:.. |.|...|||::::
pombe   123 VENLEAVALQVYIHLREHKIEAAEQTLKQALDWADEEIVLQLAQSWIKIVSGGVESYNDAFYVFE 187

  Fly   198 EFCEKFKPTPALLNGQAVVHLGLERYEEADSVLRESLLKKHNDYDTLINLMVHAHLTGKPTEAIT 262
            |. ......|..|.|.|...:.|.|.|||.|.|:.:|..:.|..:.|.|:.......|....:..
pombe   188 EL-NGTDSNPMTLTGMACADICLLRPEEALSSLKTALDSQPNYEEALSNMTTAITDLGPDAPSQA 251

  Fly   263 RNLEQLRQFYPKSDFVTD--LDKKSAEFDRLCLQY 295
            :|:  |..|...|....:  |::|:.|||....|:
pombe   252 KNI--LSSFTNSSTLKLNDHLNEKAQEFDTFSTQF 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
epsilonCOP	NP_609037.1	Coatomer_E	12..296	CDD:398419	78/290 (27%)
		TPR repeat	175..201	CDD:276809	10/26 (38%)
		TPR repeat	206..236	CDD:276809	12/29 (41%)
sec28	NP_595959.1	Coatomer_E	10..285	CDD:398419	78/290 (27%)