DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec61alpha and AT1G29310

DIOPT Version :9

Sequence 1:NP_001285674.1 Gene:Sec61alpha / 33905 FlyBaseID:FBgn0086357 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001321283.1 Gene:AT1G29310 / 839805 AraportID:AT1G29310 Length:475 Species:Arabidopsis thaliana


Alignment Length:473 Identity:327/473 - (69%)
Similarity:394/473 - (83%) Gaps:4/473 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIR 66
            |.:.|.:::||.:.|||:...:|||.|||||::|.|:|||||||.|:||:||.|:..||||||:|
plant     4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMR 68

  Fly    67 VILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMVITIGQAIV 130
            |||||||||:|||||:|||||||:||||||:||||| .:..:||||.||||||.|::|.||:|:.
plant    69 VILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVA 133

  Fly   131 YVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
            ||::||||...::|.|..:|||:|||.||:||:.|||||||||||||||||||||||||:|:|||
plant   134 YVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 198

  Fly   196 FSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYRQNLPNLMNLLATVLVFAVVIYFQG 260
            |||||:.||||.|||||||||||::.|:::||.|||:|||||||||:.|||||||:|.:||||||
plant   199 FSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQNLPNVTNLLATVLIFLIVIYFQG 263

  Fly   261 FRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFINLLGVWA 325
            |||.||::|...|||..|||||||||||:|||||||||||||.|||:|..||.||||:||||.|.
plant   264 FRVVLPVRSKSARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKFSGNFFVNLLGQWK 328

  Fly   326 DVGGGGPARSYPIGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDV 390
            :....|  :|.|:.||.|.::.|.|...:...|.|||.||||||.:||.||||||:||||||:||
plant   329 ESEYSG--QSIPVSGLAYLITAPASFADMAAHPFHALFYIVFMLTACALFSKTWIEVSGSSARDV 391

  Fly   391 AKQLKEQHMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVMADFLGAIGSGTGILLAVTIIY 455
            |||||||.|||.||||:::..||||||||||||||:|||||:|:|||:|||||||||||||||||
plant   392 AKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 456

  Fly   456 QYFEIFVKEQ-SEMGGMG 472
            ||||.|.||: ||:|..|
plant   457 QYFETFEKEKASELGFFG 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec61alphaNP_001285674.1 PTZ00219 1..469 CDD:185519 325/468 (69%)
AT1G29310NP_001321283.1 PTZ00219 1..473 CDD:185519 326/470 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 545 1.000 Domainoid score I55
eggNOG 1 0.900 - - E1_COG0201
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 655 1.000 Inparanoid score I163
OMA 1 1.010 - - QHG62204
OrthoDB 1 1.010 - - D482911at2759
OrthoFinder 1 1.000 - - FOG0001962
OrthoInspector 1 1.000 - - otm3065
orthoMCL 1 0.900 - - OOG6_100672
Panther 1 1.100 - - O PTHR10906
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1283
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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