DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec61alpha and Sec61a1

DIOPT Version :9

Sequence 1:NP_001285674.1 Gene:Sec61alpha / 33905 FlyBaseID:FBgn0086357 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_058602.1 Gene:Sec61a1 / 53421 MGIID:1858417 Length:476 Species:Mus musculus


Alignment Length:476 Identity:425/476 - (89%)
Similarity:452/476 - (94%) Gaps:0/476 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 65
            |.|||||||||||.|||||.||||||||:|||||||||||||||||||||||||||||||||||:
Mouse     1 MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWM 65

  Fly    66 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITIGQAIV 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||:||
Mouse    66 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIV 130

  Fly   131 YVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
            ||||||||||||:|||:||||.||||.||||||||||||||||||||||||||||||||||||||
Mouse   131 YVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195

  Fly   196 FSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYRQNLPNLMNLLATVLVFAVVIYFQG 260
            ||||||.||||.|||||:||||||:|||.|||||||||||||||||||||:||:.||||||||||
Mouse   196 FSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQG 260

  Fly   261 FRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFINLLGVWA 325
            ||||||||||||||||::||||||||||||||||||||||||||||||:.:|.||..::|||.|:
Mouse   261 FRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSLLGTWS 325

  Fly   326 DVGGGGPARSYPIGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDV 390
            |...|||||:||:||||||||||||.|.:|.||:||::|||||||||||||||||:|||||||||
Mouse   326 DTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDV 390

  Fly   391 AKQLKEQHMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVMADFLGAIGSGTGILLAVTIIY 455
            |||||||.||||||||.||:|||||||||||||||||||||||:|||||||||||||||||||||
Mouse   391 AKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIY 455

  Fly   456 QYFEIFVKEQSEMGGMGTLLF 476
            ||||||||||||:|.||.|||
Mouse   456 QYFEIFVKEQSEVGSMGALLF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec61alphaNP_001285674.1 PTZ00219 1..469 CDD:185519 419/467 (90%)
Sec61a1NP_058602.1 PTZ00219 1..471 CDD:185519 420/469 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838029
Domainoid 1 1.000 706 1.000 Domainoid score I124
eggNOG 1 0.900 - - E1_COG0201
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 882 1.000 Inparanoid score I402
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62204
OrthoDB 1 1.010 - - D266122at33208
OrthoFinder 1 1.000 - - FOG0001962
OrthoInspector 1 1.000 - - otm43579
orthoMCL 1 0.900 - - OOG6_100672
Panther 1 1.100 - - O PTHR10906
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1289
SonicParanoid 1 1.000 - - X1283
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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