DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec61alpha and sec61a1l

DIOPT Version :9

Sequence 1:NP_001285674.1 Gene:Sec61alpha / 33905 FlyBaseID:FBgn0086357 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_963871.1 Gene:sec61a1l / 266796 ZFINID:ZDB-GENE-021016-2 Length:476 Species:Danio rerio


Alignment Length:476 Identity:426/476 - (89%)
Similarity:455/476 - (95%) Gaps:0/476 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 65
            |.|||||||||||::||||.||||:|||:|||||||||||||||||||||||||||||||||||:
Zfish     1 MAIKFLEVIKPFCAVLPEIQKPERRIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWM 65

  Fly    66 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITIGQAIV 130
            |||:||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||
Zfish    66 RVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIV 130

  Fly   131 YVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
            ||||||||||||:|||:|||||||||.||||||||||||||||||||||||||||||||||||||
Zfish   131 YVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195

  Fly   196 FSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYRQNLPNLMNLLATVLVFAVVIYFQG 260
            ||||||.||||||||||:||||||:|||.|||||||||||||||||||||:||:.||||||||||
Zfish   196 FSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQG 260

  Fly   261 FRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFINLLGVWA 325
            ||||||||||||||||::||||||||||||||||||||||||||||||:.:|.|||.:||||.|:
Zfish   261 FRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWS 325

  Fly   326 DVGGGGPARSYPIGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDV 390
            |...|||||:||:||||||||||||.|.:|.|||||::||:||||||||||||||:|||||||||
Zfish   326 DTSTGGPARAYPVGGLCYYLSPPESFGTVLEDPIHAIIYIIFMLGSCAFFSKTWIEVSGSSAKDV 390

  Fly   391 AKQLKEQHMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVMADFLGAIGSGTGILLAVTIIY 455
            |||||||.||||||||.||:|||||||||||||||||||.|||||||||||||||||||||||||
Zfish   391 AKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIY 455

  Fly   456 QYFEIFVKEQSEMGGMGTLLF 476
            ||||||||||||:|.:|.|||
Zfish   456 QYFEIFVKEQSEVGSVGALLF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec61alphaNP_001285674.1 PTZ00219 1..469 CDD:185519 421/467 (90%)
sec61a1lNP_963871.1 PTZ00219 1..471 CDD:185519 422/469 (90%)
Plug_translocon 40..73 CDD:287522 30/32 (94%)
SecY 75..458 CDD:278759 344/382 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581836
Domainoid 1 1.000 701 1.000 Domainoid score I124
eggNOG 1 0.900 - - E1_COG0201
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 876 1.000 Inparanoid score I389
OMA 1 1.010 - - QHG62204
OrthoDB 1 1.010 - - D266122at33208
OrthoFinder 1 1.000 - - FOG0001962
OrthoInspector 1 1.000 - - otm24841
orthoMCL 1 0.900 - - OOG6_100672
Panther 1 1.100 - - LDO PTHR10906
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1289
SonicParanoid 1 1.000 - - X1283
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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