DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec61alpha and sec-61.A

DIOPT Version :9

Sequence 1:NP_001285674.1 Gene:Sec61alpha / 33905 FlyBaseID:FBgn0086357 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001255838.1 Gene:sec-61.A / 178407 WormBaseID:WBGene00013311 Length:473 Species:Caenorhabditis elegans


Alignment Length:476 Identity:421/476 - (88%)
Similarity:448/476 - (94%) Gaps:3/476 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 65
            |||||||.:||||..:||::|||||||||||:||||||||:||||||||||||||:||||||||:
 Worm     1 MGIKFLEFVKPFCGFVPEVSKPERKIQFREKMLWTAITLFVFLVCCQIPLFGIMSTDSADPFYWL 65

  Fly    66 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITIGQAIV 130
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||
 Worm    66 RVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIV 130

  Fly   131 YVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
            |||:|:||:|||||||:||||::||..||||||||||||||||||||||||||||||||||||||
 Worm   131 YVMSGLYGEPSEIGAGICLLIVVQLVIAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195

  Fly   196 FSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYRQNLPNLMNLLATVLVFAVVIYFQG 260
            |||.|:.|||||||||||||||||:|||:|||||||||||||||||||||:||.|||||||||||
 Worm   196 FSPATMNTGRGTEFEGAVIALFHLLATRSDKVRALREAFYRQNLPNLMNLMATFLVFAVVIYFQG 260

  Fly   261 FRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFINLLGVWA 325
            |||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||.|:
 Worm   261 FRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAGKFGGNFFINLLGTWS 325

  Fly   326 DVGGGGPARSYPIGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDV 390
            |..|   .||||.||||||||||||:|||..||||.::|||||||||||||||||||||||||||
 Worm   326 DNTG---YRSYPTGGLCYYLSPPESLGHIFEDPIHCIIYIVFMLGSCAFFSKTWIDVSGSSAKDV 387

  Fly   391 AKQLKEQHMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVMADFLGAIGSGTGILLAVTIIY 455
            |||||||.||||||||.||||||||||||||||||||||||||.|||:|||||||||||||||||
 Worm   388 AKQLKEQQMVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTIIY 452

  Fly   456 QYFEIFVKEQSEMGGMGTLLF 476
            ||||||||||.||||:..:.|
 Worm   453 QYFEIFVKEQQEMGGVSAMFF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec61alphaNP_001285674.1 PTZ00219 1..469 CDD:185519 417/467 (89%)
sec-61.ANP_001255838.1 PTZ00219 1..468 CDD:185519 419/469 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159895
Domainoid 1 1.000 685 1.000 Domainoid score I58
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38481
Inparanoid 1 1.050 844 1.000 Inparanoid score I226
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62204
OrthoDB 1 1.010 - - D266122at33208
OrthoFinder 1 1.000 - - FOG0001962
OrthoInspector 1 1.000 - - oto17954
orthoMCL 1 0.900 - - OOG6_100672
Panther 1 1.100 - - LDO PTHR10906
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1289
SonicParanoid 1 1.000 - - X1283
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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