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Protein Alignment mmy and uap1l1

DIOPT Version :10

Sequence 1:	NP_609032.1	Gene:	mmy / 33903	FlyBaseID:	FBgn0259749	Length:	520	Species:	Drosophila melanogaster
Sequence 2:	NP_001015926.1	Gene:	uap1l1 / 548680	XenbaseID:	XB-GENE-1002718	Length:	511	Species:	Xenopus tropicalis

Alignment Length:	494	Identity:	246/494 - (49%)
Similarity:	328/494 - (66%)	Gaps:	22/494 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    43 SLHSRLAQVGQEHLLKFWPELTNDERIDLVRDIEELNLDEIKLYFDRATVS-MNENGI--KLDDR 104
            |...|..:.||..|.:||.||:..|:..|:..:|.|...|::.:..||..: :.|:..  :||||
Frog    12 SRRRRAEESGQGQLFRFWDELSPAEKEALLEQLEMLEPRELREHCQRAREAYVRESSAPQRLDDR 76

  Fly   105 LQPLPEGKLISIARAPLEKLDAYRDEGLLQISNGHVAVLLMAGGQGTRLGFDHPKGMYDVGLQSR 169
            :||:|...|.|:..:...:|:.:..||..||:...|||||:|||||||||..:|||||.|||.|.
Frog    77 MQPVPPEFLGSVRHSGTGELERWEREGFHQIAQNKVAVLLLAGGQGTRLGVTYPKGMYSVGLPSA 141

  Fly   170 KTLFRIQAERILKLEELAQEANGKRGHITWYIMTSEHTVQPTYDYFVANNFFGLKAENVLLFEQG 234
            |||::||||||.:|::||.|.:|:...:.|||||||.|:.||..:|..:.:|||:..:|::|||.
Frog   142 KTLYQIQAERIRRLQQLASERHGETCTVPWYIMTSEFTLGPTRKFFEDHAYFGLERSDVVMFEQR 206

  Fly   235 SLPCFEYDGRIILDEKHRVARAPDGNGGIYRAMKRQGILDDMQKRGVLYLHAHSVDNILIKVADP 299
            .||...:||..||::|.::|.|||||||:|||:....||:||:.||:.|:|.:.|||||:|:|||
Frog   207 MLPAVGFDGAAILEDKAKLAMAPDGNGGLYRALSDNRILEDMEGRGIQYVHVYCVDNILVKMADP 271

  Fly   300 VFIGYCVQEKADCAAKVVEKAAPNEAVGVVAIVDGKYQVVEYSEISAKTAEMRNSDGRLTFSAGN 364
            ||||:||.:.|||.||||||..|.|.||||..|||.||||||||||.:|||.||.:|.|||:|||
Frog   272 VFIGFCVSKGADCGAKVVEKGYPAEPVGVVCRVDGVYQVVEYSEISPETAEKRNPNGALTFTAGN 336

  Fly   365 ICNHFFSSNFLQKIGSTYEQELKLHVAKKKIPFVDNAGKRLTPDKPNGIKIEKFVFDVFEFAQKF 429
            ||||||:..||:.:..:.|..|..|||.||:|:|||.|..:.|..|||||:||||||||:||:.|
Frog   337 ICNHFFTVPFLRAVIGSLEPRLNYHVAIKKVPYVDNEGNLVKPTSPNGIKMEKFVFDVFQFAKNF 401

  Fly   430 VAMEVPRDEEFSALKNSDAAGKDCPSTARSDLHRLHKKYIEGAG--------------GIVHGE- 479
            ||.||.|:||||.|||:|.|.||.|:|||..|...|.::...||              ..:.||
Frog   402 VAFEVLREEEFSPLKNADTADKDTPTTARRALLWQHYRWARRAGTHFLDETGSPIRDSHSISGEG 466

  Fly   480 ----VCEISPFVTYAGENLASHVEGKSFTSPVYLRDSRD 514
                ||||||.|:|.||.|.|:::.|..:|..::.:|.|
Frog   467 DPPAVCEISPLVSYFGEGLESYMKDKDVSSFPFVLESSD 505

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.