DRSC/TRiP Functional Genomics Resources

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Protein Alignment HemK1 and rlmG

DIOPT Version :10

Sequence 1:NP_609031.2 Gene:HemK1 / 33902 FlyBaseID:FBgn0031817 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_417555.4 Gene:rlmG / 947589 ECOCYCID:G7603 Length:378 Species:Escherichia coli


Alignment Length:317 Identity:62/317 - (19%)
Similarity:108/317 - (34%) Gaps:124/317 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRQLTRSMGPTSRLL-----KQVNYGTNAPAGTHIPVTKA--LEIGQWEEKLKAAGVEDRKFNVK 59
            |....:.:|||:..|     :.:|...|.|.....|.|.:  ||...|                 
E. coli   152 LELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDW----------------- 199

  Fly    60 CIVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTSPSVF 124
            .|.:|.         :.|.:..|:.|             ||..:||:                  
E. coli   200 TIHNHA---------NVFSRTGLDIG-------------ARFFMQHL------------------ 224

  Fly   125 IPRPETEEFMRLVIDDHKNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVLAAENA 189
               ||..|              .:::::|||:|.:.|::|...||.....::.|..|...:..|.
E. coli   225 ---PENLE--------------GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272

  Fly   190 K--MLGLLNR--FEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNA 250
            :  |...|:|  |.::|.....:.:        :::.::.|||:         |.:..:.:|   
E. coli   273 ETNMPEALDRCEFMINNALSGVEPF--------RFNAVLCNPPF---------HQQHALTDN--- 317

  Fly   251 LDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKFIAG 307
                     ||..:|..|.|.|:..|:|:: :.|.|         |.|..:||.|.|
E. coli   318 ---------VAWEMFHHARRCLKINGELYI-VANRH---------LDYFHKLKKIFG 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HemK1NP_609031.2 HemK 46..322 CDD:442135 49/266 (18%)
rlmGNP_417555.4 PRK15001 1..378 CDD:184963 62/317 (20%)

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