DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rchy1 and AT1G74770

DIOPT Version :9

Sequence 1:	NP_001260133.1	Gene:	Rchy1 / 33901	FlyBaseID:	FBgn0031816	Length:	433	Species:	Drosophila melanogaster
Sequence 2:	NP_177615.2	Gene:	AT1G74770 / 843816	AraportID:	AT1G74770	Length:	1259	Species:	Arabidopsis thaliana

Alignment Length:	310	Identity:	111/310 - (35%)
Similarity:	158/310 - (50%)	Gaps:	24/310 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   113 LNCDGMAEPMEEDQLHRFAACSRNPAAEAQQHAQPSCNSSSSSSDGSCNSNKCSSNICGAQPT-- 175
            ::||...:|.::|.:.:....||...::...:.:||..||:..:            :.|..|:
plant   964 ISCDSSLDPQKKDYIKQNLLMSRWNISQRTYNLEPSSLSSNMET------------VHGQHPSYR 1016

  Fly   176 TPESLRFGCAHYKRRAMFVTPCCNKFYKCRFCHDENETHHFDRKTLTELICSECNTRQTVREQCL 240
            .|.||.|||.||||....:.|||:|.:.|..||||...|..|||.:|:::|.:|...|.:...|.
plant  1017 DPHSLIFGCNHYKRNCKLLAPCCDKLFTCIRCHDEEADHSVDRKQITKMMCMKCLLIQPIGANCS 1081

  Fly   241 N--CGVRFGKYTCLICNLFDDADKQQYHCHGCGICRIG---GAENFFHCEVCNMCLPIQLKIDGH 300
            |  |....|||.|.||.|:|| :::.|||..|.:||:|   |.: :|||..||.|:...|.  .|
plant  1082 NTSCKSSMGKYFCKICKLYDD-ERKIYHCPYCNLCRVGKGLGID-YFHCMKCNACMSRTLV--EH 1142

  Fly   301 RCVENISRSHCPVCLGDIHTSRIPCHIPDCGHLLHKMCFDQLLASGHYTCPTCQTSLIDMTALWV 365
            .|.|.....:||:|...|.||..|.....||||:|..||.:...| |||||.|..||.||...:.
plant  1143 VCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQEYTCS-HYTCPVCSKSLGDMQVYFK 1206

  Fly   366 YLDDQAERMPVPLKYENQRVHIFCNDCHKTSKTKFHFIGLKCVHCGAYNT 415
            .||.......:|.:|.|:...|.||||.:.....:|::..||..||:||:
plant  1207 MLDALLAEEKMPDEYSNKTQVILCNDCGRKGNAPYHWLYHKCTTCGSYNS 1256

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rchy1	NP_001260133.1	zf-CHY	184..257	CDD:283213	31/74 (42%)
		RING	311..357	CDD:238093	21/45 (47%)
		zinc_ribbon_6	358..416	CDD:291274	19/58 (33%)
AT1G74770	NP_177615.2	Hr-like	37..168	CDD:213983
		Hr-like	618..764	CDD:213983
		zf-CHY	1025..1100	CDD:283213	31/74 (42%)
		zf-RING_2	1151..1194	CDD:290367	20/43 (47%)
		zinc_ribbon_6	1199..1257	CDD:291274	19/58 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	80	1.000	Domainoid score	I2987
eggNOG	1	0.900	-	-		E1_KOG1940
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101709
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1699
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.670