Sequence 1: | NP_001260133.1 | Gene: | Rchy1 / 33901 | FlyBaseID: | FBgn0031816 | Length: | 433 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012816916.1 | Gene: | rchy1 / 496979 | XenbaseID: | XB-GENE-956534 | Length: | 268 | Species: | Xenopus tropicalis |
Alignment Length: | 258 | Identity: | 119/258 - (46%) |
---|---|---|---|
Similarity: | 153/258 - (59%) | Gaps: | 14/258 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 174 PTTPESLRFGCAHYKRRAMFVTPCCNKFYKCRFCHDENETHHFDRKTLTELICSECNTRQTVREQ 238
Fly 239 CLNCGVRFGKYTCLICNLFDDADKQQYHCHGCGICRIGGAENFFHCEVCNMCLPIQLKIDGHRCV 303
Fly 304 ENISRSHCPVCLGDIHTSRIPCHIPDCGHLLHKM-----------CFDQLLASGHYTCPTCQTSL 357
Fly 358 IDMTALWVYLDDQAERMPVPLKYENQRVHIFCNDCHKTSKTKFHFIGLKCVHCGAYNTTQDVK 420 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rchy1 | NP_001260133.1 | zf-CHY | 184..257 | CDD:283213 | 31/72 (43%) |
RING | 311..357 | CDD:238093 | 23/56 (41%) | ||
zinc_ribbon_6 | 358..416 | CDD:291274 | 26/57 (46%) | ||
rchy1 | XP_012816916.1 | zf-CHY | 16..89 | CDD:283213 | 31/72 (43%) |
zinc_ribbon_6 | 198..256 | CDD:291274 | 26/57 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 126 | 1.000 | Domainoid score | I5367 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H22894 | |
Inparanoid | 1 | 1.050 | 271 | 1.000 | Inparanoid score | I2933 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002942 | |
OrthoInspector | 1 | 1.000 | - | - | oto104237 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21319 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1699 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.150 |