DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frj and lpcat3

DIOPT Version :9

Sequence 1:NP_609029.1 Gene:frj / 33900 FlyBaseID:FBgn0031815 Length:489 Species:Drosophila melanogaster
Sequence 2:XP_017206839.1 Gene:lpcat3 / 555566 ZFINID:ZDB-GENE-041111-232 Length:466 Species:Danio rerio


Alignment Length:466 Identity:111/466 - (23%)
Similarity:179/466 - (38%) Gaps:92/466 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LHSLHCFVSLALGT---AAVLLVHPSKGHLVTFAVM-------------FGYLVFFRIFDFYFGI 97
            ||..|....|||.|   |...:.|.....::.|.::             |.:.:.:.:..:|:..
Zfish    48 LHLFHTITGLALATFNFAGSQVYHSLLCVVIQFLLLRLMGRTVTCVLTSFIFQMIYLLTGYYYTA 112

  Fly    98 PGHTN----MIQMILTLKVSGIAFEKTAAWK---RLQAHDEQKKNDQRDVHQESPIEITDYDVEL 155
            ....:    |...:||||:.|:|.:.....|   :|.|  ||||         |.:..|.     
Zfish   113 TDEYDIKWTMPHCVLTLKLIGLALDYYDGGKDQSKLSA--EQKK---------SALGSTP----- 161

  Fly   156 QSLSAAEILHYSFNYIGVLTGPYYRYRTY-----RDYFEMPFKTYAPTVEATLEKLKYAVFYCAL 215
               |..|:..:|:.|.|.|.||.:..|.|     |:..::|.:.....|.| |::....:...::
Zfish   162 ---SLLEVFGFSYFYGGFLVGPQFTLRNYQMLVSREMTDVPGQPPNSVVPA-LKRFCLGLITLSI 222

  Fly   216 YLATNYMWPLDYALSDEFFNDRSFVYRLLYV--WPTFFTFRARIYTGLT---LSECVCTMAGFGA 275
            :......:...|.|:|| |....|.|:.:|:  |     .:..:|..::   ::|.||.:||.| 
Zfish   223 FTIGGPRYSDSYYLTDE-FAAHPFWYKCVYILLW-----VKINLYKYISCWLITEGVCVLAGLG- 280

  Fly   276 YPDESDPNNGEGPRKRYQHLKRDADKHTYNFTTIVNTRVLEVERCWTFREGMKHWNVCVQYWLAV 340
                   .||:.            :|..:.:....|.||...|....|...:..:|:....|:|.
Zfish   281 -------YNGKN------------EKGEHQWDACANVRVWLFETTPLFTGTINSFNINTNAWVAR 326

  Fly   341 NVYK---LFPSKKYRTGATLLCSAYWHGFRPGHYFCIMGAPFYVSLEDMWDKLVRKSATGTS--- 399
            :|:|   ...:|......|||..|.|||...|:..|.......|::|.....|||.|...||   
Zfish   327 HVFKRLRFLGNKLVSQMFTLLFLAIWHGLHSGYLICFSLEFLIVNVEKQAQSLVRDSPLLTSISQ 391

  Fly   400 ---RRVIDVIFWIFKWFAFSYLGEAFLLSSFGNIWRFYSSVYHIGYISWAAMTALGFYLTSQRKA 461
               ..::.|:.....|....|....|.|.:|....:.|.|:|..|:|.:.|...:..||   ||.
Zfish   392 SPLYPLVYVVQQSIHWLFMGYSLVPFCLFTFDKWLKVYFSIYFCGHIFFIAALLVLPYL---RKV 453

  Fly   462 AERRKKRAAEK 472
            ...| ||.:||
Zfish   454 FVPR-KRGSEK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frjNP_609029.1 MBOAT 93..427 CDD:281107 84/359 (23%)
lpcat3XP_017206839.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5202
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D881262at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.