DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment retm and AT1G55690

DIOPT Version :9

Sequence 1:	NP_001260132.1	Gene:	retm / 33899	FlyBaseID:	FBgn0031814	Length:	707	Species:	Drosophila melanogaster
Sequence 2:	NP_001323358.1	Gene:	AT1G55690 / 842018	AraportID:	AT1G55690	Length:	625	Species:	Arabidopsis thaliana

Alignment Length:	313	Identity:	86/313 - (27%)
Similarity:	151/313 - (48%)	Gaps:	33/313 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   175 ITHVERWTSPSDATKSPTLDQASDQQHSILLDGDFIARSLGQLSP----------MQESKLLELR 229
            |:..||..|.....|...::.::...||:...|   .|.:....|          .:||.:||.|
plant    22 ISEDERRRSKIGNLKKKAINASTKFTHSLKKRG---KRKIDYRVPAVSIEDVRDEKEESVVLEFR 83

  Fly   230 KMLDGVDDLER--VP----SYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPA 288
            :.|     |||  :|    .|.|:||||.|||.::.:...:..:.||||:|:..|.:|.::....
plant    84 RKL-----LERDLLPPRHDEYHTLLRFLKARDLNIEKTTQLWEEMLRWRKEYGTDTILEDFDFEE 143

  Fly   289 V--VVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQ-KINESAE 350
            :  |::::|.|:|.:||:||||||.|||......|::...:|..|:..:...|..:| |....:.
plant   144 LEEVLQYYPQGYHGVDKEGRPVYIERLGKAHPSKLMRITTIDRYLKYHVQEFERALQEKFPACSI 208

  Fly   351 RLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERN-YPETMGRVLVVRAPRVF-PIAWT 413
            ..::.:.:.:.::|::||.::: :.|....|:..:..::.: ||||:.|:.:|.|...| .:.|.
plant   209 AAKRRICSTTTILDVQGLGIKN-FTPTAANLVAAMSKIDNSYYPETLHRMYIVNAGTGFKKMLWP 272

  Fly   414 IVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGG 466
            ....|:|..|.:|.....|.....   |.:.:|...:|:||||.|......||
plant   273 AAQKFLDAKTIAKIHVLEPKSLFK---LHEVIDSSQLPEFLGGSCSCFGDGGG 322

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	19/51 (37%)
		CRAL_TRIO	293..456	CDD:279044	44/165 (27%)
AT1G55690	NP_001323358.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	89	1.000	Domainoid score	I2681
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133487at2759
OrthoFinder	1	1.000	-	-		FOG0000197
OrthoInspector	1	1.000	-	-		otm2464
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X399
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.820