Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_568006.1 | Gene: | SFH12 / 829801 | AraportID: | AT4G36490 | Length: | 543 | Species: | Arabidopsis thaliana |
Alignment Length: | 484 | Identity: | 115/484 - (23%) |
---|---|---|---|
Similarity: | 206/484 - (42%) | Gaps: | 116/484 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 211 ARSLGQLSPMQESKLLELRKMLDGVDDL--ERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRR 273
Fly 274 EHRIDALLAEYSKPAV--VVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALH 336
Fly 337 ICE-EGIQKINESAERL--EKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVER----NYPE 394
Fly 395 TMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCK 459
Fly 460 TMIHEGGLV---------PKTLYKMNSLEDH------------------DDEVTAELPTTAAAQA 497
Fly 498 -----LVPGKRLSANQQHDHRNLYKSVDLKAGFAHELLIRN---EDPKS-----VLTWDFDVMRN 549
Fly 550 DLHFTLYRVTQELPEK------------------NDSA-------VSYFDLQDFV---------- 579
Fly 580 EGVNYFREEPTLICRHKESVQGSHVMHHN 608 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 13/47 (28%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 49/169 (29%) | ||
SFH12 | NP_568006.1 | CRAL_TRIO_N | 54..100 | CDD:215024 | 13/54 (24%) |
SEC14 | 120..290 | CDD:214706 | 52/178 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I2681 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1133487at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000197 | |
OrthoInspector | 1 | 1.000 | - | - | otm2464 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100867 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X399 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.720 |