Protein Alignment retm and AT3G24840

DIOPT Version :9

• Sequence 1: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Sequence 2: NP_001327840.1
• Gene: AT3G24840 / 822082
• AraportID: AT3G24840
• Length: 580
• Species: Arabidopsis thaliana
• Alignment Length: 567
• Identity: 130/567 - (22%)
• Similarity: 225/567 - (39%)
• Gaps: 160/567 - (28%)

  Fly   144 MEKMGMKQYTQTTLKGKEIIEFFIGQLREEGITHVERWTSPSDATKSPTLDQASDQQHSILLDGD 208
            |..:|.......|.|||.  :.:|....:|.||...     |.:.|...:..::...||:...|.
plant     1 MPALGEILLVPETDKGKS--KDYIEVSEDEKITRTR-----SRSLKKKAIKASNKLTHSLRKRGK 58

  Fly   209 FIARSLGQLSPM--------QESKLLEL-RKMLDGVDDL-ERVPSYQTILRFLAARDWHVSQAYA 263
            .:|   .|.:|:        :|.|.:.: ||.|..:|.| .|...|.|:||||.||.:.:.:...
plant    59 RVA---DQYAPIVIEDVRDEEEEKAVNVFRKALVSLDLLPPRHDDYHTMLRFLKARRFDLEKTVQ 120

  Fly   264 MLCDSLRWRREHRIDALLAE--YSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLG 326
            |..:.|:||:|:.:|.::.:  |.:...|.:::|.|:|.:|::||||||.|||.:|...|:|...
plant   121 MWEEMLKWRKENGVDTIIQDFVYDEYEEVQQYYPHGYHGVDREGRPVYIERLGKIDPGKLMKVTT 185

  Fly   327 MDGLLRLALHICEEGIQK----------------INESAERLEKPVLNWSLLVDLEGLSMRHLWR 375
            ::..||  .|:  :|.:|                ||.|           :.::|:.|:|    |.
plant   186 LERFLR--YHV--QGFEKTFSEKFPACSIAAKRHINSS-----------TTIIDVHGVS----WM 231

  Fly   376 PGIKALLNIIETVER----NYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAH 436
            ...|...:::..:::    |||||:.::.::.|...|.:.|..|..|:|..|.||....|   ..
plant   232 SFRKLAQDLVMRMQKIDGDNYPETLNQMYIINAGNGFKLVWNTVKGFLDPKTTSKIHVLG---NK 293

  Fly   437 MKDGLAQYLDEEIVPDFLGGPCKTMIHEGGLV------------------------PKTL----- 472
            .:..|.:.:|...:|:||||.|| ..||||.:                        ||.:
plant   294 YRSHLLEIIDPSELPEFLGGNCK-CAHEGGCMRFNKGPWNDPEIMKLVRSRDAMYKPKEMGLLEN 357

  Fly   473 ---YKMNSLEDH--------------------DDEVTAELPTTAAAQALVPGKRLSANQQHD--- 511
               .|:.||..|                    :.:..|:|  :..|:|:..|:.    :|.|
plant   358 GEVAKLFSLRQHVNTDMSSPDGGHVRERESHPEHDKRAQL--SNQAEAVGVGRM----EQSDSTS 416

  Fly   512 --------HRNLYKSVDLKAGFAHELLIR----------------NEDPKSVLTWDFDVMRNDLH 552
                    .|:|..|:...|.|....:::                |:.|::.|..:..|
plant   417 PLPNNLAVERSLTTSLQKVASFLARFILQLLGSLCLMFRILGRLVNKQPENQLRPELSV------ 475

  Fly   553 FTLYRVTQELPEKNDSAVSYFDLQDFVEGVNYFREEPTLICRHKESV 599
                .|:|:..........:..||:....|....::|:.|.:.||.:
plant   476 ----SVSQQQVPPPQVHPCWLRLQNLETMVTVLCDKPSSIPQEKEDI 518

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550	7/28 (25%)
		CRAL_TRIO_N	222..268	CDD:215024	17/47 (36%)
		CRAL_TRIO	293..456	CDD:279044	49/182 (27%)
AT3G24840	NP_001327840.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	89	1.000	Domainoid score	I2681
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133487at2759
OrthoFinder	1	1.000	-	-		FOG0000197
OrthoInspector	1	1.000	-	-		otm2464
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X399
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.780