Protein Alignment retm and SFH3

DIOPT Version :10

• Sequence 1: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Sequence 2: NP_565514.1
• Gene: SFH3 / 816693
• AraportID: AT2G21540
• Length: 548
• Species: Arabidopsis thaliana
• Alignment Length: 528
• Identity: 123/528 - (23%)
• Similarity: 220/528 - (41%)
• Gaps: 94/528 - (17%)

  Fly   202 SILLDGDFIARSLGQLSPMQESKLLELRKMLDGVDDLERVPS----YQTILRFLAARDWHVSQAY 262
            |:.:..|.....|..:...:::.:|:           |.:||    :..:||||.||.:.:.:|.
plant    58 SVSIVDDIDLEELQAVDAFRQALILD-----------ELLPSKHDDHHMMLRFLRARKFDLEKAK 111

  Fly   263 AMLCDSLRWRREHRIDALLAEYSKPAV--VVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSL 325
            .|..|.:.||:|..:|.::.::....:  |::::|.|:|.:|||||||||.|||.:|...|::..
plant   112 QMWTDMIHWRKEFGVDTIMEDFDFKEIDEVLKYYPQGYHGVDKDGRPVYIERLGQVDATKLMQVT 176

  Fly   326 GMDGLLRLALHICEEGIQ-KINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVE 389
            .:|..::..:...|:... |:...:...:|.:...:.::|::|:.::..    .||..::::.::
plant   177 TIDRYVKYHVREFEKTFNIKLPACSIAAKKHIDQSTTILDVQGVGLKSF----SKAARDLLQRIQ 237

  Fly   390 R----NYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIV 450
            :    |||||:.|:.::.|...|.:.|:.|.:|:|..|.:|....|   ...:..|.:.:|...:
plant   238 KIDSDNYPETLNRMFIINAGSGFRLLWSTVKSFLDPKTTAKIHVLG---NKYQSKLLEIIDSNEL 299

  Fly   451 PDFLGGPCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAELPTTAAAQALVPGKRLSANQQHDHRNL 515
            |:||||.| |...:||.:.......|     |.::   .......:...|.|.||        |:
plant   300 PEFLGGNC-TCADKGGCMRSDKGPWN-----DPDI---FKMVQNGEGKCPRKTLS--------NI 347

  Fly   516 YK---SVDLKAGFAHELLIRN----EDPKSVLTWDFDVMRNDLHFTLYRVTQELPEKNDSAVSYF 573
            .:   |||.......:...:|    |:.|.:...|..|..:.....|::.....||...|||
plant   348 EEKTISVDENTTMKSDSFAKNKFDAENTKFIPMIDKTVNASTWPTNLHKSNYPEPEDLYSAV--- 409

  Fly   574 DLQDFVEGVNYFREEPTLICRHKESVQGSHVMHHNDSYLMHWFSPSGAQLNVFYEVLSSANYKGS 638
                          :|:. .|..|......||    |.:|...:......|:..::..:|.|.|.
plant   410 --------------KPSQ-RRGGEGYLFGGVM----SLVMGLMTVVRLTKNMPRKLTEAAIYGGE 455

  Fly   639 MTSLQSAFSSNSSAASSVQ--SRXYEKAGDGGTNGAEWRS----PALEEPIAADILTGTLM---E 694
            :...::...||....|.|:  :. .||.          ||    ||...|....|||..|.   |
plant   456 VDKAETTMVSNQEYMSMVKRMAELEEKC----------RSLDNQPAAFSPEKEQILTAALSRVDE 510

  Fly   695 KSLNLFET 702
            ..|.|.:|
plant   511 LELQLAQT 518

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:398400
		CRAL_TRIO_N	222..268	CDD:215024	12/49 (24%)
		CRAL_TRIO	293..456	CDD:459890	45/167 (27%)
SFH3	NP_565514.1	CRAL_TRIO_N	71..117	CDD:215024	12/56 (21%)
		SEC14	137..307	CDD:214706	48/176 (27%)