DRSC/TRiP Functional Genomics Resources

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Protein Alignment retm and Sec14l5

DIOPT Version :9

Sequence 1:NP_001260132.1 Gene:retm / 33899 FlyBaseID:FBgn0031814 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_001121197.1 Gene:Sec14l5 / 665119 MGIID:3616084 Length:696 Species:Mus musculus


Alignment Length:719 Identity:311/719 - (43%)
Similarity:434/719 - (60%) Gaps:92/719 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQKFQSPVRVYKYPFELVMKAYERRFPTCPQMPIVLDCEVIKDESLEDGAKRNTSRRCKLAVDA 65
            ||||:|||||||||||||||.|||:||||||.:|:.|..||:.:....|||.....|.|:|.|||
Mouse     1 MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPLIPVFLGSEVLGEWRSTDGAVHTVERSCRLRVDA 65

  Fly    66 PYIFKKLIGVDHVYFLQHNFLDLANRTLSIEAVNESFSSRIEIFERCRYYAHPDNSEWTCFDQSA 130
            |.:.:|:.||:||.|:|.|.|:...|||.|:|.||:|:||:.:.|.|||..||:|.:||||:|||
Mouse    66 PRLLRKIAGVEHVVFIQRNVLNWRERTLLIDAHNETFASRVTVKESCRYTVHPENEDWTCFEQSA 130

  Fly   131 TLDIKNFFGFEHSMEKMGMKQYTQTTLKGKEIIEFFIGQLREEGITHVERWT------------- 182
            :||:::|||||.::||:.|||||....:|||:||.::.:|..:|.:|:.|||             
Mouse   131 SLDVRSFFGFESTLEKIAMKQYTANVKRGKEVIEHYLNELISQGTSHIPRWTPAPVQEEDVRSQL 195

  Fly   183 -----------SPSDATKSPTLDQA---SDQQHSILLDGDFIARSLGQLSPMQESKLLELRKMLD 233
                       .|||| ..|..:.|   .|:     ||.|:|.|.||.|||||||.|::||..|.
Mouse   196 VPQCPSSLDMEGPSDA-PGPASEMAIADGDK-----LDADYIERCLGHLSPMQESCLVQLRHWLQ 254

  Fly   234 GVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEHFPGGW 298
            .... .::|..:.|||||.|||:|:.:|..|||.||.||::|::|.||..:..|..:.|.:.|||
Mouse   255 ETHK-GKIPKDEHILRFLRARDFHLDKARDMLCQSLSWRKQHQVDLLLQTWRPPPPLQEFYAGGW 318

  Fly   299 HHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLV 363
            |:.|.||||:||||||.||.|||:|::|.:.||:..|.:.|||.::...:..:..:|:.:|:.|:
Mouse   319 HYQDIDGRPLYILRLGQMDTKGLMKAVGEEALLQHVLSVNEEGQKRCEGNTRQFGRPISSWTCLL 383

  Fly   364 DLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFL 428
            |||||:||||||||:||||.:||.||.|||||:||:|:||||||||:.||:||.||:|:||.|||
Mouse   384 DLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRRKFL 448

  Fly   429 FYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAELPTTA 493
            .|.........||..|||::::||||||.....:.|||:|||:||    |.:.:.|         
Mouse   449 IYSGSNYQGPGGLVDYLDKDVIPDFLGGESVCNVPEGGMVPKSLY----LTEEEQE--------- 500

  Fly   494 AAQALVPGKRLSANQQHDHRNLYKSVDLKAGFAHELLIRNEDPKSVLTWDFDVMRNDLHFTLYRV 558
                       .|:|.......|.|..:..|..:|:.:...:.:||:|||||::|.|:.|:||..
Mouse   501 -----------QADQLQQWSETYHSASVLRGTPYEVAMEIPEGESVITWDFDILRGDVVFSLYHA 554

  Fly   559 TQ--ELPEKNDSAVSYFDLQD--FVEGVNYFREEPTLICRHKESVQGSHVMHHNDSYLMHW---F 616
            .|  :|..:.....:...|.|  ::.||:|.|.|..||||..:|:|||||......||:.|   .
Mouse   555 KQAPKLSPQEPGVRASGQLIDKSWILGVDYSRVEAPLICREGQSIQGSHVTQWPGIYLLQWQIHS 619

  Fly   617 SPS-------------------GAQLNVFY--EVLSSANYKGSMTSLQSA------FSSNSSAAS 654
            ||.                   |.:..:.|  |||:|.:::|||:||:|.      .|:.:|::|
Mouse   620 SPESVACSLPGVDDVLTALHSPGPKCKLLYYCEVLASEDFRGSMSSLESCASRFSQLSATTSSSS 684

  Fly   655 SVQS 658
            |.||
Mouse   685 SGQS 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
retmNP_001260132.1 PRELI 17..173 CDD:282550 80/155 (52%)
CRAL_TRIO_N 222..268 CDD:215024 20/45 (44%)
CRAL_TRIO 293..456 CDD:279044 90/162 (56%)
Sec14l5NP_001121197.1 PRELI 17..173 CDD:368069 80/155 (52%)
CRAL_TRIO_N 243..288 CDD:215024 20/45 (44%)
SEC14 306..479 CDD:214706 94/172 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842061
Domainoid 1 1.000 219 1.000 Domainoid score I2629
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H96163
Inparanoid 1 1.050 589 1.000 Inparanoid score I991
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49351
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 1 1.000 - - FOG0000197
OrthoInspector 1 1.000 - - otm43965
orthoMCL 1 0.900 - - OOG6_100867
Panther 1 1.100 - - LDO PTHR23324
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X399
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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