Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609968.3 | Gene: | CG10026 / 35226 | FlyBaseID: | FBgn0032785 | Length: | 299 | Species: | Drosophila melanogaster |
Alignment Length: | 305 | Identity: | 59/305 - (19%) |
---|---|---|---|
Similarity: | 119/305 - (39%) | Gaps: | 61/305 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 182 TSPSDATKSPTLDQASDQQHSILLDGDFIARSLGQLS------PMQESKLLELRK--MLDGVDDL 238
Fly 239 ERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEHFPGGWHHL-- 301
Fly 302 ----------DKDGRPVYILRLGHMDVKGLLK--SLGMDGLLRLALHICEEGIQKINESAERLEK 354
Fly 355 PVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFI 419
Fly 420 DEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHE 464 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 11/47 (23%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 33/176 (19%) | ||
CG10026 | NP_609968.3 | CRAL_TRIO_N | 43..90 | CDD:215024 | 11/46 (24%) |
SEC14 | 112..265 | CDD:238099 | 33/174 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45456651 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |