Protein Alignment retm and CG3823

DIOPT Version :9

• Sequence 1: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Sequence 2: NP_572313.1
• Gene: CG3823 / 31573
• FlyBaseID: FBgn0029863
• Length: 295
• Species: Drosophila melanogaster
• Alignment Length: 267
• Identity: 61/267 - (22%)
• Similarity: 98/267 - (36%)
• Gaps: 49/267 - (18%)

  Fly   217 LSPMQESKLLELRKMLDGVDDLERVPSY-QTILRFLAARDWH-----VSQAYAMLCDSLRWRREH 275
            |:...|.:|:..| :.|..|.|:..|.. |.|.|.|..|..|     :|.|..:|..:...|.:|
  Fly     4 LNEKAEDQLMTTR-ISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDLSAAQRLLELNYGLRNKH 67

  Fly   276 R--------IDALLAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDV-----KGLLKSLGM 327
            .        :||...:..:.|.:|. .||    |..:...:...||...|.     ...:|...|
  Fly    68 AHIFIDRDPLDASSQQLLQVADLVP-LPG----LTPENNKLLFYRLIDFDADKFNFTAAIKVFFM 127

  Fly   328 DGLLRLALHICEEGIQKINESAERL---EKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVE 389
            ....|.|           .|:.|||   |.||.      |:.|.::|||.:..:.||...::.|:
  Fly   128 VADCRFA-----------TENEERLSDGEIPVF------DMAGYTLRHLTKTALGALRVYMKFVQ 175

  Fly   390 RNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFL 454
            ..:|..:..:.|:..|........:|..||.........|:.|:.    |...::....::|:..
  Fly   176 EAHPVRLKEIHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNA----DTPYRHFPRSMLPEEY 236

  Fly   455 GGPCKTM 461
            ||....|
  Fly   237 GGEAGKM 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	16/51 (31%)
		CRAL_TRIO	293..456	CDD:279044	35/170 (21%)
CG3823	NP_572313.1	SEC14	90..239	CDD:238099	37/174 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810