Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100007.1 | Gene: | Ttpal / 296349 | RGDID: | 1305754 | Length: | 343 | Species: | Rattus norvegicus |
Alignment Length: | 374 | Identity: | 78/374 - (20%) |
---|---|---|---|
Similarity: | 134/374 - (35%) | Gaps: | 81/374 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 185 SDATK-SPTLDQASDQQ----------HSILLDGDFIARSLGQLSPMQESKLLELRKMLDGVDDL 238
Fly 239 ERVPSYQT------ILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEHFPGG 297
Fly 298 WHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHI-C-------------EEGIQKINES 348
Fly 349 AERL----EKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFP 409
Fly 410 IAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGGLVPKTLYK 474
Fly 475 MNSLEDHDDEVTAELPTTAA-----AQALVPGKRLSANQQHDHRNLYKS 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 14/51 (27%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 36/180 (20%) | ||
Ttpal | NP_001100007.1 | CRAL_TRIO_N | 57..103 | CDD:215024 | 12/47 (26%) |
SEC14 | 122..278 | CDD:238099 | 37/183 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |