DRSC/TRiP Functional Genomics Resources

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Protein Alignment retm and Sec14l5

DIOPT Version :9

Sequence 1:NP_001260132.1 Gene:retm / 33899 FlyBaseID:FBgn0031814 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_001129182.2 Gene:Sec14l5 / 287060 RGDID:1564638 Length:696 Species:Rattus norvegicus


Alignment Length:727 Identity:311/727 - (42%)
Similarity:436/727 - (59%) Gaps:108/727 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQKFQSPVRVYKYPFELVMKAYERRFPTCPQMPIVLDCEVIKDESLEDGAKRNTSRRCKLAVDA 65
            ||||:|||||||||||||||.|||:||||||.:|:.|..||:.:....|||.....|.|:|.|||
  Rat     1 MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPLIPVFLGSEVLSECRSADGAVHTVERSCRLRVDA 65

  Fly    66 PYIFKKLIGVDHVYFLQHNFLDLANRTLSIEAVNESFSSRIEIFERCRYYAHPDNSEWTCFDQSA 130
            |.:.:|:.||:||.|:|.|.|:...|||.|:|.||:|:||:.:.|.|||..||:|.:||||:|||
  Rat    66 PRLLRKIAGVEHVVFIQRNVLNWRERTLLIDAHNETFASRVTVKEHCRYTVHPENEDWTCFEQSA 130

  Fly   131 TLDIKNFFGFEHSMEKMGMKQYTQTTLKGKEIIEFFIGQLREEGITHVERWT------------- 182
            :||:::|||||.::||:.|||||....:|||:||.::.:|..:|.:|:.|||             
  Rat   131 SLDVRSFFGFESTLEKIAMKQYTANVKRGKEVIEHYLSELISQGASHIPRWTPAPVREADVRSQL 195

  Fly   183 -----------SPSDATKSPTLDQASDQQHSILLDGDFIARSLGQLSPMQESKLLELRKMLDGVD 236
                       .|||| .:|..:.|:.....  ||.|:|.|.||.|||||||.|::||:.|....
  Rat   196 VCPCPSSLETDGPSDA-PAPASEMATADGDK--LDADYIERCLGHLSPMQESCLVQLRRWLQETH 257

  Fly   237 DLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEHFPGGWHHL 301
            . .::|..:.|||||.|||:|:.:|..|||.||.||::|::|.||..:..||.:.|.:.||||:.
  Rat   258 K-GKIPKDEHILRFLRARDFHLDKARDMLCQSLSWRKQHQVDLLLQTWRPPAPLQEFYAGGWHYQ 321

  Fly   302 DKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLE 366
            |.||||:||||||.||.|||:|::|.:.||:..|.:.|||.::...:..:..:|:.:|:.|:|||
  Rat   322 DIDGRPLYILRLGQMDTKGLMKAVGEEALLQHVLSVNEEGQKRCEGNTRQFGRPISSWTCLLDLE 386

  Fly   367 GLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYG 431
            ||:||||||||:||||.:||.||.|||||:||:|:||||||||:.||:||.||:|:||.|||.|.
  Rat   387 GLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRRKFLIYS 451

  Fly   432 PDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAELPTTAAAQ 496
            ........||..|||::::||||||.....:.|||:|||:||    |.:.:.|            
  Rat   452 GSNYQGPGGLVDYLDKDVIPDFLGGESVCNVPEGGMVPKSLY----LTEEEQE------------ 500

  Fly   497 ALVPGKRLSANQQHDHRNLYKSVDLKAGFAHELLIRNEDPKSVLTWDFDVMRNDLHFTLY----- 556
                    .|:|.......|.|..:..|..||:.:...:.:||:|||||::|.|:.|:||     
  Rat   501 --------QADQLRQWSETYHSASVLRGSPHEVAMEIPEGESVITWDFDILRGDVVFSLYHAKQA 557

  Fly   557 ----------RVTQELPEKNDSAVSYFDLQDFVEGVNYFREEPTLICRHKESVQGSHVMHHNDSY 611
                      |.:.:|.:||           ::.||:|.|.|..||||..:|:|||||......|
  Rat   558 PKLSPQEPGVRASGQLIDKN-----------WILGVDYSRVEAPLICREGQSIQGSHVTQWPGVY 611

  Fly   612 LMHW--FSP--------------------SGAQLNVFY--EVLSSANYKGSMTSLQSA------F 646
            |:.|  .||                    .|.:..:.|  |||:|.:::|||:||:|.      .
  Rat   612 LLQWQIHSPPESVACSLPGVDDVLTALHSPGPKCKLLYYCEVLASEDFRGSMSSLESCASRFSQL 676

  Fly   647 SSNSSAASSVQS 658
            |:.::::||.||
  Rat   677 SATTTSSSSGQS 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
retmNP_001260132.1 PRELI 17..173 CDD:282550 80/155 (52%)
CRAL_TRIO_N 222..268 CDD:215024 20/45 (44%)
CRAL_TRIO 293..456 CDD:279044 90/162 (56%)
Sec14l5NP_001129182.2 PRELI 17..173 CDD:309720 80/155 (52%)
Amidase <179..309 CDD:327489 50/133 (38%)
CRAL_TRIO_N 243..288 CDD:215024 20/45 (44%)
CRAL_TRIO 314..477 CDD:306996 91/162 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345464
Domainoid 1 1.000 218 1.000 Domainoid score I2571
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H96163
Inparanoid 1 1.050 593 1.000 Inparanoid score I938
OMA 1 1.010 - - QHG49351
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 1 1.000 - - FOG0000197
OrthoInspector 1 1.000 - - otm46053
orthoMCL 1 0.900 - - OOG6_100867
Panther 1 1.100 - - LDO PTHR23324
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X399
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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