Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001166954.1 | Gene: | Rlbp1 / 19771 | MGIID: | 97930 | Length: | 317 | Species: | Mus musculus |
Alignment Length: | 313 | Identity: | 68/313 - (21%) |
---|---|---|---|
Similarity: | 131/313 - (41%) | Gaps: | 69/313 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 192 TLDQASDQQHSILLDGDFIARSLGQLSPMQESKLLELRKMLDGV----DDL-----ERVPSYQT- 246
Fly 247 -ILRFLAARDWHVSQAYAMLCDSLRWRREH--RIDALLAEYSKPAVVVEHFPGGWHHLDKDGRPV 308
Fly 309 YILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHL 373
Fly 374 --WRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAH 436
Fly 437 MKDGLAQYLDEEIVP-DFLGGPCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAE 488 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 16/56 (29%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 35/165 (21%) | ||
Rlbp1 | NP_001166954.1 | CRAL_TRIO_N | 60..117 | CDD:215024 | 16/56 (29%) |
CRAL_TRIO | 143..292 | CDD:395525 | 36/176 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |