Protein Alignment retm and F28H7.8

DIOPT Version :9

• Sequence 1: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Sequence 2: NP_505746.2
• Gene: F28H7.8 / 185099
• WormBaseID: WBGene00009241
• Length: 410
• Species: Caenorhabditis elegans
• Alignment Length: 451
• Identity: 101/451 - (22%)
• Similarity: 178/451 - (39%)
• Gaps: 110/451 - (24%)

  Fly   217 LSP-----MQESKLLELRKMLDGVDDLERVPSYQT---ILRFLAARDWHVSQAYAMLCDSLRWRR 273
            |||     |.::.:.::|..:..|.|    |.|.|   :||:|.:.|:::.:...:|...|:||:
 Worm     6 LSPVDIENMNDAAIEQVRLQVSDVID----PRYDTKWNMLRWLQSNDFNIPKTVHLLKKHLKWRK 66

  Fly   274 EHRID----ALLAEYSKPAVVVEHFP----GGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGL 330
            :.::|    ..|.::|...  .:|.|    |.....|.| |.|.:.|.|.:||.||:||:.....
 Worm    67 DRKLDEPESQSLLQFSDAR--RKHAPIDIIGPQRKEDGD-RLVVVDRAGRIDVSGLMKSVQPTEY 128

  Fly   331 LRLALHICEEGIQKINESAERLEKPVLNWSL------LVDLEGLSMRHLWRPGIKALLNII---- 385
            |       .|..:...|...||.|......:      :.|||.|:..       ..||.::
 Worm   129 L-------HEMFRSFEEIQRRLMKMEAETGVQCYMHYIFDLEALNFD-------PTLLGVVNGPF 179

  Fly   386 ----ETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLD 446
                :.|.::|.|.:.:.:|:.:|....:.|:.:|.||.|.::.:.:|.|   ::.|:.|...:|
 Worm   180 RVSWQLVGQHYREFIDKFIVINSPSYINVLWSALSPFIPEQSKQRIVFAG---SNWKEELLDIVD 241

  Fly   447 EEIVPDFLGG--PCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAELPTTAAAQALVPGKRLSANQQ 509
            :|.:|:..||  |....:.....:||:||.         ::.|:.||              .:|.
 Worm   242 KECLPERYGGMIPDIQCLKPVDPIPKSLYW---------KLPAQYPT--------------MDQL 283

  Fly   510 HDHRNLYKSVDLKAGFAHELLIRNEDPKSVLTWDFDVMRNDLHFTLYRVTQELPEKND------- 567
            |       .|.:.|. .|.:||...|........:....||:..|||....:...:||
 Worm   284 H-------KVSVSAS-KHRMLIYKVDKPDTELLMYSHNENDITITLYYSKNKNVSENDLELAVAP 340

  Fly   568 ------SAVSYFDLQDFVEGVNYFR--EEPT--------LICRHKESVQGSHVMHHNDSYL 612
                  .|:..||......|..|.:  .|.:        :|...|||.:....::.|:.::
 Worm   341 IPKCGLPAMDLFDYNCEYPGYYYIKLANEASWLLPSTYRIIVIEKESGKELEPLNLNEKWI 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	11/48 (23%)
		CRAL_TRIO	293..456	CDD:279044	44/180 (24%)
F28H7.8	NP_505746.2	CRAL_TRIO_N	16..61	CDD:215024	11/48 (23%)
		SEC14	93..251	CDD:214706	42/175 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133487at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820