Protein Alignment retm and cgr-1

DIOPT Version :9

• Sequence 1: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Sequence 2: NP_508618.2
• Gene: cgr-1 / 180650
• WormBaseID: WBGene00020847
• Length: 383
• Species: Caenorhabditis elegans
• Alignment Length: 421
• Identity: 90/421 - (21%)
• Similarity: 168/421 - (39%)
• Gaps: 85/421 - (20%)

  Fly   214 LGQLSPMQESKLLELRKMLDGVDDLERVPSYQT---ILRFLAARDWHVSQAYAMLCDSLRW---- 271
            |.:|:..|:.|:.|||....  |.|...|.|.|   :||:|...|:.:.    ::...:|:
 Worm    10 LNELTAHQKDKIAELRSKTK--DILATYPEYDTDFSLLRWLMGWDYKID----VIVPKMRYAVET 68

  Fly   272 --------RREHRIDALLAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMD 328
                    ::...:|.:..:....:.|.|:||||.....|.|..||:..:.....|.|:|:....
 Worm    69 LVNLGMNNKQTTSVDQINRDIKNMSAVAEYFPGGIMGKSKRGDVVYMQAMAKAHPKTLVKAGPTS 133

  Fly   329 GLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYP 393
            .|.:|.:...|...:.|.::.:..|:. :...:::||:|.||..|:.|.:|..::::..::..:|
 Worm   134 QLFQLCISETEMSFKIIRQTEQETERK-MGVIIIMDLDGFSMDLLYTPTLKVYMSLLTMLQNIFP 197

  Fly   394 ETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGG-- 456
            :...|:.::..|.:....:.:||..:...||.|..|...|   .|:.|.:.:.||.:....||
 Worm   198 DFARRIYIINCPAMMSAVYAMVSPVLSSQTREKVRFLDKD---WKNHLIEEIGEENIFMHWGGVK 259

  Fly   457 ----PCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAELPTTAAAQALVPGKRLSANQQHDHRNLYK 517
                ||.. |..||.||::|:..:|.:...|.....:|..:..:..:.|:  |....|
 Worm   260 KHEHPCGD-IRMGGKVPESLWYADSHKLEGDRTKIAVPARSKTEIKMYGE--SGKYFH------- 314

  Fly   518 SVDLKAGFAHELLIRNEDPKSVLTWDFDVMRNDLHFTLYRVTQELPEKNDSAV--SYFDLQDFVE 580
                                    |.:.|...|:.|::        ||:...|  .:..|.:|..
 Worm   315 ------------------------WLWRVSSGDIDFSI--------EKDGRVVWPVFRCLTEFHP 347

  Fly   581 GVNYFREEPTLICRHKESVQGSHVMHHNDSY 611
            .:..|:.|.|          |.:|...|:|:
 Worm   348 EIGSFKIEET----------GEYVFIFNNSH 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	13/48 (27%)
		CRAL_TRIO	293..456	CDD:279044	38/162 (23%)
cgr-1	NP_508618.2	SEC14	91..257	CDD:214706	40/169 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133487at2759
OrthoFinder	1	1.000	-	-		FOG0000197
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820