Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497717.2 | Gene: | C34C12.6 / 175452 | WormBaseID: | WBGene00007925 | Length: | 400 | Species: | Caenorhabditis elegans |
Alignment Length: | 380 | Identity: | 75/380 - (19%) |
---|---|---|---|
Similarity: | 141/380 - (37%) | Gaps: | 97/380 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 233 DGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALL---AEYSKPAVVVEHF 294
Fly 295 PGGWHHLDKDGRPVYILR-LGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLN 358
Fly 359 WSLLVDLEGLSMRHLWRP--GIKALLNIIETVERN-YPETMGRVLVVRAPRVFPIAWTIVSAFID 420
Fly 421 EHTRSKFLFYGPDCAHMKDGLA-QYLDEEIVPDFLGGPCKTMIHEGGLVPKTLYKMNSLEDHDDE 484
Fly 485 VTAELPTTAAAQALVPGKRLSANQQHDHRNLYKSVDLKAGFAHELLIRNEDPKSVLTWDFDVM-- 547
Fly 548 ----------RNDLHF-TLYRVTQELPEK------NDSAVSYFDLQDFVEGVNYF 585 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 7/34 (21%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 31/167 (19%) | ||
C34C12.6 | NP_497717.2 | SEC14 | 91..265 | CDD:214706 | 44/220 (20%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000197 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |