Protein Alignment retm and F18A11.2

DIOPT Version :9

• Sequence 1: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Sequence 2: NP_496771.1
• Gene: F18A11.2 / 174945
• WormBaseID: WBGene00008929
• Length: 388
• Species: Caenorhabditis elegans
• Alignment Length: 411
• Identity: 80/411 - (19%)
• Similarity: 161/411 - (39%)
• Gaps: 78/411 - (18%)

  Fly   218 SPMQESKLLELRKMLDGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLA 282
            :|::::.:|.:...:|..|| :.......:.|:|.|......:|...|...|..|:  .||  |.
 Worm     4 NPVEKAAILRIIDSIDARDD-DYCAHEFNVYRWLVAYGNEEEEAAKALKRHLNIRK--TID--LN 63

  Fly   283 EYSKPAVVVE-----HFP---GGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICE 339
            .||....:.|     :.|   .|.:|.| |.:.:...|.|.:|:.||:.::.|...:::.|.:.|
 Worm    64 SYSSKTELEEDELNKYVPIDVIGQNHQD-DNKVLMFERTGKIDISGLVDNVLMHKFMQIKLKMME 127

  Fly   340 EGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLN-----IIETVERNYPETMGRV 399
            ...||: .:|||..........::||:|:|    :.|.:.::|.     :..|:..:||:.:.::
 Worm   128 GVHQKV-VAAERKTGRQSGGLFIMDLDGIS----FSPKLISVLTGPYRIMWGTLFDHYPQLLQKI 187

  Fly   400 LVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHE 464
            ::|.||....:.....|.|:.|..:.|.:.......   ..:.::.|:..:|..|||.    :.:
 Worm   188 IIVNAPSFVNVLHQACSPFLPEDYKEKIVITSEPAI---GAIQKHADKCFLPSDLGGD----LEK 245

  Fly   465 GGLVPKTLY-KMNSLEDHDDEVTAELPTTAAAQALVPGKRLSA----------------NQQHDH 512
            ...:|...: |||...:.:.|..:.|..:      ||..:.:.                |:...|
 Worm   246 TTSLPMAPFPKMNKKYEKEKEKVSLLAIS------VPAGKYTVQKFSWKKGDEVEFFLHNESSFH 304

  Fly   513 RNLY------KSVDLKAGFAHELLIRNEDP--KSVLTWDFDVMRNDLHFTLY------------R 557
            ..::      |.:||    ..|:.:..|.|  ..:.:|.:.|..:..:|..|            .
 Worm   305 YFMFHSEEDTKDMDL----WREMTVGCERPALSQIDSWKYTVPIDGFYFIRYGNHNSWYFSTTVN 365

  Fly   558 VTQELPEKNDSAVSYFDLQDF 578
            |...:..:|...:....::.|
 Worm   366 VNHFISNENGERIELVPIETF 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	9/45 (20%)
		CRAL_TRIO	293..456	CDD:279044	37/170 (22%)
F18A11.2	NP_496771.1	SEC14	72..244	CDD:214706	40/184 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133487at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820