Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_495168.1 | Gene: | H41C03.1 / 173994 | WormBaseID: | WBGene00019268 | Length: | 396 | Species: | Caenorhabditis elegans |
Alignment Length: | 284 | Identity: | 64/284 - (22%) |
---|---|---|---|
Similarity: | 118/284 - (41%) | Gaps: | 44/284 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 244 YQT---ILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEHFPGGW-HHLDKD 304
Fly 305 GRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLS 369
Fly 370 MRHLWRPGIKALLNII--------ETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSK 426
Fly 427 FLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGG-------------LVPKTLYKMNSL 478
Fly 479 EDHDDEVTAELPTTAAAQALVPGK 502 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 7/26 (27%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 39/171 (23%) | ||
H41C03.1 | NP_495168.1 | SEC14 | 69..242 | CDD:214706 | 42/184 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1133487at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |