Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446253.2 | Gene: | Sec14l2 / 116486 | RGDID: | 621779 | Length: | 403 | Species: | Rattus norvegicus |
Alignment Length: | 456 | Identity: | 120/456 - (26%) |
---|---|---|---|
Similarity: | 211/456 - (46%) | Gaps: | 88/456 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 214 LGQLSPMQESKLLELRKMLDGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRID 278
Fly 279 ALLAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQ 343
Fly 344 KINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVF 408
Fly 409 PIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGG---------PCKTMIHE 464
Fly 465 GGLVPKTLYKMNSLEDHDDEVTAELPTTAAAQALVPGKRLSANQQHDHRNLYKSVDLKAGFAHEL 529
Fly 530 LIRNEDPKSVLTWDFDVMRNDLHFTLY------------RVTQELPEKNDSAVSYFDLQDFVEGV 582
Fly 583 NYFREEPTLICRHKESVQGSHVMHHNDSY-LMHWFSPSGAQLNVFYEVL-------SSANYKGSM 639
Fly 640 T 640 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | |
CRAL_TRIO_N | 222..268 | CDD:215024 | 13/45 (29%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 55/162 (34%) | ||
Sec14l2 | NP_446253.2 | CRAL_TRIO_N | 13..59 | CDD:215024 | 13/45 (29%) |
SEC14 | 76..244 | CDD:214706 | 58/170 (34%) | ||
GOLD_2 | 300..381 | CDD:290608 | 18/102 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166345469 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1471 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1133487at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000197 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.750 |