DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment retm and LOC110437765

DIOPT Version :9

Sequence 1:	NP_001260132.1	Gene:	retm / 33899	FlyBaseID:	FBgn0031814	Length:	707	Species:	Drosophila melanogaster
Sequence 2:	XP_021330443.1	Gene:	LOC110437765 / 110437765	-ID:	-	Length:	262	Species:	Danio rerio

Alignment Length:	248	Identity:	124/248 - (50%)
Similarity:	168/248 - (67%)	Gaps:	16/248 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MVQKFQSPVRVYKYPFELVMKAYERRFPTCPQMPIVLDCEVIKDESLEDGAKRNTSRRCKLAVDA 65
            ||||:|||||||||||||:|.||:|||||||.:|:.:..::|.:...||||:....|||.:.|:|
Zfish     1 MVQKYQSPVRVYKYPFELIMAAYDRRFPTCPLIPMFVKSDIINESHSEDGAELFIERRCTVDVEA 65

  Fly    66 PYIFKKLIGVDHVYFLQHNFLDLANRTLSIEAVNESFSSRIEIFERCRYYAHPDNSEWTCFDQSA 130
            |.:.|::.|||::||:|.|.|:...|||.|||.|||||||:.::|.|.|..||:|.:||||:|||
Zfish    66 PRLLKRIAGVDYMYFIQKNSLNRRERTLHIEAYNESFSSRVNVYEHCCYTVHPENEDWTCFEQSA 130

  Fly   131 TLDIKNFFGFEHSMEKMGMKQYTQTTLKGKEIIEFFIGQLREEGITHVERWTSPS-----DATKS 190
            ::|||:|||||.:.||:.||||..:..||||||||.:.||.||||||:.||..|:     ..:.:
Zfish   131 SMDIKSFFGFESTAEKIAMKQYATSIKKGKEIIEFHLKQLEEEGITHMPRWVPPTAPQLIPVSSA 195

  Fly   191 PTLDQASDQQH-----------SILLDGDFIARSLGQLSPMQESKLLELRKML 232
            ..:...:.:.|           ...||.|:|:|.||.|:|.|||.|:.||:.|
Zfish   196 KPIPACTSRAHLGSTDVVPGSPDDKLDADYISRYLGTLTPFQESCLIRLRQWL 248

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
retm	NP_001260132.1	PRELI	17..173	CDD:282550	83/155 (54%)
		CRAL_TRIO_N	222..268	CDD:215024	6/11 (55%)
		CRAL_TRIO	293..456	CDD:279044
LOC110437765	XP_021330443.1	PRELI	17..173	CDD:309720	83/155 (54%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1133487at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010