Sequence 1: | NP_001260132.1 | Gene: | retm / 33899 | FlyBaseID: | FBgn0031814 | Length: | 707 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021332743.1 | Gene: | si:dkey-237i9.1 / 100535835 | ZFINID: | ZDB-GENE-060503-441 | Length: | 719 | Species: | Danio rerio |
Alignment Length: | 737 | Identity: | 328/737 - (44%) |
---|---|---|---|
Similarity: | 446/737 - (60%) | Gaps: | 103/737 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVQKFQSPVRVYKYPFELVMKAYERRFPTCPQMPIVLDCEVIKDESLEDGAKRNTSRRCKLAVDA 65
Fly 66 PYIFKKLIGVDHVYFLQHNFLDLANRTLSIEAVNESFSSRIEIFERCRYYAHPDNSEWTCFDQSA 130
Fly 131 TLDIKNFFGFEHSMEKMGMKQYTQTTLKGKEIIEFFIGQLREEGITHVERWT-SPSDATKS---- 190
Fly 191 --------PTL---------------DQASDQQHSI----------LLDGDFIARSLGQLSPMQE 222
Fly 223 SKLLELRKMLDGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKP 287
Fly 288 AVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERL 352
Fly 353 EKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSA 417
Fly 418 FIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGGLVPKTLYKMNSLEDHD 482
Fly 483 DEVTAELPTTAAAQALVPGKRLSANQQHDHRNLYKSVDLKAGFAHELLIRNEDPKSVLTWDFDVM 547
Fly 548 RNDLHFTLYRVTQ-ELPEKNDSAVSY-----------FDLQDFVEGVNYFREEPTLICRHKESVQ 600
Fly 601 GSHVMHHNDSYLMHW---FSPSGAQLNV---------------------FYEVLSSANYKGSMTS 641
Fly 642 LQSAFS--SNSSAA--SSVQSR 659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retm | NP_001260132.1 | PRELI | 17..173 | CDD:282550 | 88/155 (57%) |
CRAL_TRIO_N | 222..268 | CDD:215024 | 18/45 (40%) | ||
CRAL_TRIO | 293..456 | CDD:279044 | 96/162 (59%) | ||
si:dkey-237i9.1 | XP_021332743.1 | PRELI | 17..173 | CDD:309720 | 88/155 (57%) |
CRAL_TRIO_N | 260..305 | CDD:215024 | 18/45 (40%) | ||
CRAL_TRIO | 331..494 | CDD:306996 | 97/162 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 218 | 1.000 | Domainoid score | I2602 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 537 | 1.000 | Inparanoid score | I1159 |
OMA | 1 | 1.010 | - | - | QHG49351 | |
OrthoDB | 1 | 1.010 | - | - | D1133487at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000197 | |
OrthoInspector | 1 | 1.000 | - | - | oto40555 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100867 | |
Panther | 1 | 1.100 | - | - | O | PTHR23324 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X399 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.980 |