DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9527 and Acox1

DIOPT Version :9

Sequence 1:NP_001137800.1 Gene:CG9527 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_059036.1 Gene:Acox1 / 50681 RGDID:619757 Length:661 Species:Rattus norvegicus


Alignment Length:704 Identity:223/704 - (31%)
Similarity:356/704 - (50%) Gaps:97/704 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PDFRSGPLEEYRERAS--FCYKRMNVVLEGE-DHIRLKHKVWQWMEQHPDYQREPGSDLERTR-- 106
            ||.|       :||||  |..:.:..:|:|. ::.|.:.::...:...||:|.|..:.|.|::  
  Rat     3 PDLR-------KERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRY 60

  Fly   107 EMANKRQ-HLLWEQQFYGVNEYLGTPHLLLAFGQAIFSYDFSTSVKFGLSTGMFPSTLVSNG-SG 169
            |:|.|:. .::.:.:.||:::    |..::.| :.::..:|...|  ||:..||..||::.| :.
  Rat    61 EVAVKKSATMVKKMREYGISD----PEEIMWF-KKLYLANFVEPV--GLNYSMFIPTLLNQGTTA 118

  Fly   170 RLGKYVAKIADNRILGAYALTEISHGTNALGMRTRATYDVKRQEFIIHTPDFEAAKCWVGNLGKT 234
            :..|::....:.:|:|.||.||:.|||:..|:.|.||||.|.||||:::|...:.|.|.|.||||
  Rat   119 QQEKWMRPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKT 183

  Fly   235 CTHAIVYAQLYVPDDKHQGLQAFLVPIRDERTLLPFPGVTVGDMGEKIGLNGIDNGFVMFNQYRI 299
            ..||||.||| :...:..||.||:||||:..|..|.||:||||:|.|.|...:|||::..:.|||
  Rat   184 SNHAIVLAQL-ITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRI 247

  Fly   300 PKANLLSKTGDIDAQGNYTSKIKDERKRLGASLGALSVGRVNITAITYVALSKAVTIATRYAASR 364
            |:.|:|.|...:...|.|...:.::     .:.|.:...|..:......:||||.|||.||:|.|
  Rat   248 PRENMLMKYAQVKPDGTYVKPLSNK-----LTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVR 307

  Fly   365 RQFGPTNSPAEWPVIEYQSQQYRLIPHLATTIALRVATLWIGKENVDLTMKGFTGEDTSQAGM-- 427
            ||.....|..|..::::|:|||:|.|.|||..|..    ::|:...:..::  ..|...|..:  
  Rat   308 RQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFH----FVGRYMKETYLR--INESIGQGDLSE 366

  Fly   428 --EIHAISSALKPVATWAARDGIQECREACGGHGYLKSSGLGELRNDNDANCTYEGENNTLIQQA 490
              |:||:::.||...||.|..||:|||.|||||||..|||:..:.......||:||||..::.|.
  Rat   367 LPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQT 431

  Fly   491 SNWLISLQRNNADFVAVSPL--ETVSFLKDMDTILQSKGQERTPAEVLDPLNL--------LNAL 545
            :.:|:.:.    |.|....|  ..||:|.|:            |::.:.|..:        :|:|
  Rat   432 ARFLMKIY----DQVRSGKLVGGMVSYLNDL------------PSQRIQPQQVAVWPTMVDINSL 480

  Fly   546 NWLT-VWQL------DTTVKRVEE--QQREGKDAFETRNNIQVFAAQKLSIIYGERTIYYVFYK- 600
            ..|| .::|      :...|.::.  ..|:.|:......::.:..|       .|...:||..| 
  Rat   481 EGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRA-------SEAHCHYVVVKV 538

  Fly   601 FVIGLP---DSAEKKVLQQVLSFYGAHLVTKYSAAFYRGGYFRENS----NQLELYEQGILALLP 658
            |...||   |.|.:.||:.:...|..:.:::      :||.|.|.|    .||......||.||.
  Rat   539 FSDKLPKIQDKAVQAVLRNLCLLYSLYGISQ------KGGDFLEGSIITGAQLSQVNARILELLT 597

  Fly   659 LLKNEAIALVDAIAPTDFILNSPLGMSDGNVYQHL----QRTLVSTPGVYERPH 708
            |::..|:|||||....|..|.|.||..|||||::|    :::.::...|:|..|
  Rat   598 LIRPNAVALVDAFDFKDMTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYH 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9527NP_001137800.1 ACAD 52..694 CDD:299127 217/683 (32%)
PLN02312 56..682 CDD:215178 209/663 (32%)
Acox1NP_059036.1 AXO 3..638 CDD:173839 220/689 (32%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.