DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9527 and Arc42

DIOPT Version :9

Sequence 1:NP_001137800.1 Gene:CG9527 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster


Alignment Length:427 Identity:105/427 - (24%)
Similarity:167/427 - (39%) Gaps:110/427 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SDLERTREMANK------------------RQHLLWEQQFYGVNEYLGT-----PHLLLAFGQAI 141
            |.|..|.:|..|                  |:||..|:|...:.| ||.     |..|...|...
  Fly    25 SALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGE-LGVMAVAIPEELGGTGLDY 88

  Fly   142 FSYDF----------STSVKFGLSTGMFPSTLVSNGSGRLGK-YVAKIADNRILGAYALTEISHG 195
            .:|..          |..|...::..::...|:|.|:....| |:........:|.:||:|..:|
  Fly    89 VAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNG 153

  Fly   196 TNALGMRTRATYDVKRQEFIIHTPDFEAAKCWVGNLGKTCTHAIVYA----QLYVPDDKHQGLQA 256
            ::|....|.||  .|...|:::     ..|.|:.|..: ...|||:|    ||     ||:|:.|
  Fly   154 SDAGAASTIAT--DKGDHFVLN-----GTKAWITNAFE-AEAAIVFATTNKQL-----KHKGISA 205

  Fly   257 FLVPIRDERTLLPFPGVTVGDMGEKIGLNGIDNGFVMFNQYRIPKANLLSKTGDIDAQGNYTSKI 321
            |:||...:       |.::|...:|:|:.|.....::|....:||.|:|.:.|       :..||
  Fly   206 FIVPKATK-------GFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPG-------FGFKI 256

  Fly   322 KDERKRLGASLGALSVGRVNITAITYVALSKAVTIATRYAASRRQFGPTNSPAEWPVIEYQSQQY 386
                     ::..|..||:.|..........|:.:|..||..|:.||.       |:.:.||.|.
  Fly   257 ---------AMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGK-------PIAKLQSIQQ 305

  Fly   387 RLIPHLATTIALRVATLWIGKENVDLTMKGFTGED-----TSQAGMEIHAISSALKPVATWAARD 446
            ::..   .::|:..|.|        ||.:....:|     |.:|.|...|.|.|    ||..:  
  Fly   306 KIAD---MSLAMESARL--------LTWRAAWLKDQKQPYTKEAAMAKLAASEA----ATLCS-- 353

  Fly   447 GIQECREACGGHGYLKSSGLGELRNDNDANCT--YEG 481
              .:|.:..||.||:  :.:...|:..||..|  |||
  Fly   354 --HQCIQILGGMGYV--TDMAAERHYRDARITEIYEG 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9527NP_001137800.1 ACAD 52..694 CDD:299127 105/427 (25%)
PLN02312 56..682 CDD:215178 105/427 (25%)
Arc42NP_650840.1 CaiA 27..405 CDD:224871 104/425 (24%)
SCAD_SBCAD 29..401 CDD:173847 103/423 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460779
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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