DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9527 and gcdha

DIOPT Version :9

Sequence 1:NP_001137800.1 Gene:CG9527 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_957180.1 Gene:gcdha / 393860 ZFINID:ZDB-GENE-040426-1855 Length:441 Species:Danio rerio


Alignment Length:407 Identity:100/407 - (24%)
Similarity:156/407 - (38%) Gaps:103/407 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 MANKRQH----LLWEQQFYGVNEYLGTPHLLLAFGQAIFSYDFSTSVKFGL-------------S 155
            |||:.:|    :|.|....||   ||.  .:..:|.|..||     |.:||             |
Zfish    88 MANRNEHFHREILNEMGELGV---LGP--TIQGYGCAGTSY-----VAYGLIAREVERVDSGYRS 142

  Fly   156 TGMFPSTLVSNGSGRLG------KYVAKIADNRILGAYALTEISHGTNALGMRTRATYDVKRQEF 214
            .....|:||.:.....|      ||:.|:|...|||.:.|||.:||::..||.|:|.|:...:.:
Zfish   143 VMSVQSSLVMHPINAYGTEEQKQKYLPKLARGEILGCFGLTEPNHGSDPAGMETKAKYNPSSRTY 207

  Fly   215 IIHTPDFEAAKCWVGN--LGKTCTHAIVYAQLYVPDDKHQGLQAFLVPIRDERTLLPFPGVTVGD 277
            .|     ...|.|:.|  ....|   :|:|:  ..|.|.:|   |::    ||.:   .|::...
Zfish   208 SI-----SGTKTWITNSPYADIC---VVWAK--CEDGKVRG---FVL----ERGM---KGLSTPK 252

  Fly   278 MGEKIGLNGIDNGFVMFNQYRIPKANLL----SKTGDIDAQGNYTSKIKDERKRLGASLGALSVG 338
            :..|..|.....|.::.::..:|:.|||    ...|......|         .|.|.:.|||...
Zfish   253 IEGKFSLRASATGMIVMDEVEVPEENLLPHVSGLAGPFGCLNN---------ARFGIAWGALGAA 308

  Fly   339 RVNITAITYVALSKAVTIATRYAASRRQFGPTNSPAEWPVIEYQSQQYRLIPHLA-TTIALRVAT 402
            .....|            |.:|...|.|||.       |:...|..|.::...|. .||.|: :.
Zfish   309 EFCFHA------------ARQYTMDRIQFGV-------PLARNQLIQKKMADMLTEITIGLQ-SC 353

  Fly   403 LWIGKENVDLTMKGFTGEDTSQAGMEIHAISSALKPVATWAARDGIQECREACGGHGYLKSSGLG 467
            |.:|:.   :..|..|.|           :.|.||..:...|.|..::.|:..||:|......:.
Zfish   354 LQLGRL---IDQKKHTPE-----------MISLLKRNSCGKALDIARQARDMLGGNGIADEYHII 404

  Fly   468 ELRNDNDANCTYEGENN 484
            ....:.:|..||||.::
Zfish   405 RHVMNLEAVNTYEGTHD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9527NP_001137800.1 ACAD 52..694 CDD:299127 100/407 (25%)
PLN02312 56..682 CDD:215178 100/407 (25%)
gcdhaNP_957180.1 GCD 51..437 CDD:173840 100/407 (25%)
CaiA 63..437 CDD:224871 100/407 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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