DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9527 and Acadl

DIOPT Version :9

Sequence 1:NP_001137800.1 Gene:CG9527 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_036951.1 Gene:Acadl / 25287 RGDID:2011 Length:430 Species:Rattus norvegicus


Alignment Length:494 Identity:104/494 - (21%)
Similarity:184/494 - (37%) Gaps:118/494 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YSG---RREEKAAANIYD--DKRIFPDFRSGPLEEYRE--RASFCYKRMNVVLEGEDHIRLKHKV 84
            :||   |.|..:|..:.|  .:|||    |...:.:||  |..|           ::.:...|:.
  Rat    29 HSGAEARLETPSAKKLTDIGIRRIF----SSEHDIFRESVRKFF-----------QEEVIPYHEE 78

  Fly    85 WQWMEQHPDYQREPGSDLERTREMANKRQHLLWE----QQFYGVN-----EYLGTPHLLLAFGQA 140
            |                 |:..|::.:    |||    |...|:|     ..:|...|..|....
  Rat    79 W-----------------EKAGEVSRE----LWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWE 122

  Fly   141 IFSYDFSTSVKFGLSTGMFPSTLVSNGS-GRLGKYVAKIADNRILGAYALTEISHGTNALGMRTR 204
            ..:|...|...|.|.:.:....:.:.|: .::.:::.::...:.:||.|:||...|::..|:||.
  Rat   123 EQAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTN 187

  Fly   205 ATYDVKR--QEFIIHTPDFEAAKCWVGNLGKTCTHAIVYAQLYVPDDKHQGLQAFLVPIRDERTL 267
            |    ||  .::|::.........|:.:|  ....|:...:...|   ..|:..|||    |..:
  Rat   188 A----KRSGSDWILNGSKVFITNGWLSDL--VIVVAVTNREARSP---AHGISLFLV----ENGM 239

  Fly   268 LPFPGVTVGDMGEKIGLNGIDNGFVMFNQYRIPKANLLSKTGDIDAQGNY--TSKIKDERKRLGA 330
               .|...|....|:|:...|...:.|...|:|.:.||.:    :.:|.|  ..::..||     
  Rat   240 ---KGFIKGKKLHKMGMKAQDTAELFFEDVRLPASALLGE----ENKGFYYLMQELPQER----- 292

  Fly   331 SLGALSVGRVNITAITYVALSKAVTIATR-YAASRRQFGPTNSPAEWPVIEYQSQQYRLIPHLAT 394
                |.:..:.|:|..::...      || |...|:.||.|       |...|:.|::| ..|.|
  Rat   293 ----LLIADLAISACEFMFEE------TRNYVRQRKAFGKT-------VAHIQTVQHKL-AELKT 339

  Fly   395 TIALRVATLWIGKENVD--LTMKGFTGEDTSQAGMEIHAISSALKPVATWAARDGIQECREACGG 457
            .|.       :.:..||  |.:......|::.|.|..:..|.....||        .:|.:..||
  Rat   340 NIC-------VTRAFVDSCLQLHETKRLDSASASMAKYWASELQNTVA--------YQCVQLHGG 389

  Fly   458 HGYLKSSGLGELRNDNDANCTYEGENNTLIQQASNWLIS 496
            .||:....:.:...|......|.|.|..:.:..:..::|
  Rat   390 WGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIVS 428

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9527NP_001137800.1 ACAD 52..694 CDD:299127 94/464 (20%)
PLN02312 56..682 CDD:215178 94/460 (20%)
AcadlNP_036951.1 CaiA 53..427 CDD:224871 95/467 (20%)
LCAD 56..427 CDD:173849 93/460 (20%)