DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9527 and acox-1.3

DIOPT Version :9

Sequence 1:NP_001137800.1 Gene:CG9527 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_493263.1 Gene:acox-1.3 / 184167 WormBaseID:WBGene00008566 Length:660 Species:Caenorhabditis elegans


Alignment Length:693 Identity:204/693 - (29%)
Similarity:320/693 - (46%) Gaps:112/693 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LEEYRERASFCYKRMNVVLEGEDHIRLKHKVWQWMEQ----HPDYQREPGSDLERTREMANKRQH 114
            |.|.|:.|:|...:|..|:.|.:.|..:.:  |..|.    |...:.:|...:.|..::|...:.
 Worm    12 LTEERKNATFDTDKMAAVIYGREEIASRRR--QLTESISRIHELAESKPLVFMTREEKIAESCRK 74

  Fly   115 L-----LWEQQFYG----------VNEYLGTPHLLLAFGQAIFSYDFSTSVKFGLSTGMFPSTLV 164
            |     .|.|..:.          ..|.||.....||                 |...||..|||
 Worm    75 LEVLSRHWNQTPFNRDNEEDALHIYREVLGMEGHPLA-----------------LHDTMFIPTLV 122

  Fly   165 SNGS-GRLGKYVAKIADNRILGAYALTEISHGTNALGMRTRATYDVKRQEFIIHTPDFEAAKCWV 228
            :..| .:..|::.:.....|:|.||.||:.||||...:.|.|||....||||::||...|.|.|.
 Worm   123 AQASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEFILNTPTITALKWWP 187

  Fly   229 GNLGKTCTHAIVYAQLYVPDDKHQGLQAFLVPIRDERTLLPFPGVTVGDMGEKIGLNGIDNGFVM 293
            |.|||:..:|||.|.|.:.|..: |...|:|.:|||:|.:|..|:.|||:|.|:..||.|||::.
 Worm   188 GALGKSSNNAIVVANLLIKDQNY-GPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLG 251

  Fly   294 FNQYRIPKANLLSKTGDIDAQGNYTSKIKDERKRLGASLGALSVGRVNITAITYVALSKAVTIAT 358
            ||.:|||:.|||.:...::|.|.|   ||....::|.|  ::...|..:.....:.|:.|:.||.
 Worm   252 FNNHRIPRTNLLMRHTKVEANGTY---IKPSHAKIGYS--SMVKVRSRMAMDQGLFLASALVIAV 311

  Fly   359 RYAASRRQFGPTNSPAEWPVIEYQSQQYRLIPHLATTIALRVATLWIGKENVDL---TMKGFTGE 420
            ||:|.|||....:...:..|::||:||:||.|.||...|.    ::.|.|.:.|   .:|.....
 Worm   312 RYSAVRRQGFLEDKTQKVKVLDYQTQQHRLFPSLARAYAF----IFTGFETIHLYSQLLKDVDMG 372

  Fly   421 DTSQAGM-EIHAISSALKPVATWAARDGIQECREACGGHGYLKSSGLGELRNDNDANCTYEGENN 484
            :||  || ::||::|.||.|.|....:||::.|.|||.|||..:|.:.|:.......|||||||.
 Worm   373 NTS--GMADLHALTSGLKSVVTHQTGEGIEQARMACGEHGYSMASYISEIYGVAIGGCTYEGENM 435

  Fly   485 TLIQQASNWLISLQRNNADFVAVSPLETVSFLKD--------MDTILQSKGQERTPAEVLDPLNL 541
            .::.|.:.:|:               ::|..:|.        |.:.|.:||....          
 Worm   436 VMLLQLARYLV---------------KSVELIKSGEEKKLGPMVSYLAAKGGHPD---------- 475

  Fly   542 LNALN-WLT---------VWQLDTTVKRVEEQQREGKDAFETRNNIQVFAAQKLSIIYGERTIYY 596
            |::|| ::|         .|:......::.| ..|.::....::.:::..|.:|   :....|..
 Worm   476 LSSLNGYVTAFEHMARRQAWKATEKFLKLME-TGESREVAWNKSAVELTRASRL---HTRLFIIE 536

  Fly   597 VFYKFVIGLPDSAEKKVLQQVLSFYGAHLVTKY---SAAFYRGGYFRENSNQLELYEQGILALLP 658
            .|.:.|..:.|...|:||..:|     ||...|   ..|.|...:.  :|.||:.....:...|.
 Worm   537 AFMRRVSRIEDIPVKEVLTDLL-----HLHVNYELLDVATYALEFM--SSTQLDYIRDQLYLYLE 594

  Fly   659 LLKNEAIALVDAIAPTDFILNSPLGMSDGNVYQHLQRTLVSTP 701
            .::..|::|||:...:|..|.|.||..|||||::|.:...|:|
 Worm   595 KIRPSAVSLVDSFQISDMQLRSVLGRRDGNVYENLFKWAKSSP 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9527NP_001137800.1 ACAD 52..694 CDD:299127 201/684 (29%)
PLN02312 56..682 CDD:215178 193/670 (29%)
acox-1.3NP_493263.1 ACAD 11..634 CDD:299127 202/688 (29%)
PLN02443 12..657 CDD:178062 204/693 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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