DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox3 and acox-1.4

DIOPT Version :10

Sequence 1:NP_001137800.1 Gene:Acox3 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_493264.1 Gene:acox-1.4 / 173164 WormBaseID:WBGene00008567 Length:662 Species:Caenorhabditis elegans


Alignment Length:698 Identity:204/698 - (29%)
Similarity:325/698 - (46%) Gaps:114/698 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PDFRSGPLEEYRERASFCYKRMNVVLEGEDHI-RLKHKVWQWMEQHP---DYQREPGSD-LERTR 106
            ||     |.|.||:.:|...:|..|:.|.:.: |.:.::.:.:.:.|   |.|..|..| ||:..
 Worm    13 PD-----LTEEREKGTFDTDKMAAVIYGSEKLARRRREISEAVSKIPELADTQPFPFMDRLEKIT 72

  Fly   107 EMANKRQHLLWEQQFYGVNEYLGTPHLLLAFGQAIFSYDFSTSVK---FGLSTGMFPSTLVSNGS 168
            |.:.|.:.|  ......:.:|...       |:.:..|...|.::   ..|...||...|||..|
 Worm    73 EGSRKLEVL--NNNIRDIIDYDDN-------GERLHIYQEVTGMEGHPLALHEVMFIPALVSQAS 128

  Fly   169 -GRLGKYVAKIADNRILGAYALTEISHGTNALGMRTRATYDVKRQEFIIHTPDFEAAKCWVGNLG 232
             .:..|::.:.....|:|.||.||:.||||...:.|.|||....|||:::||...|.|.|.|.||
 Worm   129 KEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLETTATYFPDTQEFVLNTPTTTALKWWPGALG 193

  Fly   233 KTCTHAIVYAQLYVPDDKHQGLQAFLVPIRDERTLLPFPGVTVGDMGEKIGLNGIDNGFVMFNQY 297
            |:..:|:|...:.: ..|..|...|:|.:|||:|.:|..|:.|||:|.|:..||.||||:.|:::
 Worm   194 KSSNYAVVVVDMII-KGKSYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMSFNGGDNGFLGFDKF 257

  Fly   298 RIPKANLLSKTGDIDAQGNYT---------SKIKDERKRLGASLGALSVGRVNITAITYVALSKA 353
            |:|:.|||.:...::|.|.|.         |.:...|..:....|||              |::|
 Worm   258 RVPRTNLLMRHVRVEADGTYVKPPHAKVNHSAMVHVRSHMATGQGAL--------------LAQA 308

  Fly   354 VTIATRYAASRRQFGPTNSPAEWPVIEYQSQQYRLIPHLATTIALRVATLWIGKENVDL---TMK 415
            :.||.||:|.|||....|...|..|::||:||:||.|.||...|.    ::.|.|.:.|   .:|
 Worm   309 LIIAVRYSAVRRQGFLENKTQEVKVLDYQTQQHRLFPSLARAYAF----IFTGFETIHLYSQLLK 369

  Fly   416 GFTGEDTSQAGM-EIHAISSALKPVATWAARDGIQECREACGGHGYLKSSGLGELRNDNDANCTY 479
            .....:||  || ::||::|.||.|.|....:||::.|.|||||||..:|.:.|:.......|||
 Worm   370 DVDMGNTS--GMADLHALTSGLKSVVTHQTGEGIEQARMACGGHGYSMASYISEIYGIAIGGCTY 432

  Fly   480 EGENNTLIQQASNWLISLQRNNADFVAVSPLETVSFLKD--------MDTILQSKGQERTPAEVL 536
            ||||..::.|.:.:|:               ::|..:|.        |.:.|.:||....     
 Worm   433 EGENMVMLLQLARYLV---------------KSVELIKSGEAKKLGPMVSYLAAKGGHPD----- 477

  Fly   537 DPLNLLNALN-WLT---------VWQLDTTVKRVEEQQREGKDAFETRNNIQVFAAQKLSIIYGE 591
                 |::|| ::|         .|:......::.| ..|.::....::.:::..|.:|   :..
 Worm   478 -----LSSLNGYVTAFEHMARRQAWKATEKFLKLME-SGESREIAWNKSTVELTRASRL---HTR 533

  Fly   592 RTIYYVFYKFVIGLPDSAEKKVLQQVLSFYGAHLVTKY---SAAFYRGGYFRENSNQLELYEQGI 653
            ..|...|.:.|..:.|...|:||..:|     ||...|   ..|.|...:.  :|.||:.....:
 Worm   534 LFIIEAFMRRVSRIEDIPVKEVLTDLL-----HLHVNYELLDVATYALEFM--SSTQLDYIRDQL 591

  Fly   654 LALLPLLKNEAIALVDAIAPTDFILNSPLGMSDGNVYQHLQRTLVSTP 701
            ...|..::..|::|||:...:|..|.|.||..|||||::|.:...|:|
 Worm   592 YLYLEKIRPSAVSLVDSFQISDMQLRSVLGRRDGNVYENLFKWAKSSP 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox3NP_001137800.1 ACAD 52..694 CDD:447864 199/684 (29%)
acox-1.4NP_493264.1 ACAD 13..636 CDD:447864 202/693 (29%)

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