DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox3 and acdh-5

DIOPT Version :10

Sequence 1:NP_001137800.1 Gene:Acox3 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_491942.1 Gene:acdh-5 / 172400 WormBaseID:WBGene00016491 Length:442 Species:Caenorhabditis elegans


Alignment Length:494 Identity:110/494 - (22%)
Similarity:174/494 - (35%) Gaps:124/494 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SLLT------ALGDYYSGRREEKAAANIYDDKRIFPDFRSGPLEEYRERASFCYKRMNVVLEGED 76
            :|||      |||          ||||..:      .|||..|...|...|......:.  :.|.
 Worm     4 ALLTKLKNNAALG----------AAANNLN------KFRSSNLGNQRRSVSVAVTSTSP--KSEK 50

  Fly    77 HIRLKHKVWQWMEQHPDYQREPGSDLERTREMANKRQHLLWEQQ----------------FYGVN 125
            .:..:|.::.  |.|...|:..|..:|   |..|... ..|||.                .:|||
 Worm    51 PVAREHMIYD--ETHFVMQKSLGKLIE---EKINPNV-AKWEQDGRYPAHLVFKMLGDHGVFGVN 109

  Fly   126 --EYLGTPHLLLAFGQAIF---------SYDFSTSVKFGLSTGMFPSTLVSNGSGRL-GKYVAKI 178
              |..|.....:|...||.         |...|..|:..:||    ..|...||..| .:::...
 Worm   110 KPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDMST----PALAQFGSDALRERFLRPS 170

  Fly   179 ADNRILGAYALTEISHGTNALGMRTRATYDVKRQ--EFIIHTPDFEAAKCWVGNLGKTCTHAIVY 241
            ....::.:.|::|...|::...:.|.|    :||  :.||:     .:|.|:.| |.....|.|.
 Worm   171 ITGDLVSSLAVSEPHAGSDVSAVHTHA----RRQGSDLIIN-----GSKMWITN-GGQADWACVL 225

  Fly   242 AQLYVPDDKHQGLQAFLVPIRDERTLLPFPGVTVGDMGEKIGLNGIDNGFVMFNQYRIPKANLLS 306
            .......:.|:......||       |...||......:|:|:...|...:.|...|:|.:.::.
 Worm   226 VNTSNTSNVHKNKSLVCVP-------LDAVGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIG 283

  Fly   307 KTGDIDAQGNYTSKIKDERKRLGASLGALSVGRVNITAITYVALSKAVTIATRYAASRRQFGPTN 371
            :.|  ...|....:..|||      |..::||        .:.|.|.:.....||..|..||.| 
 Worm   284 EEG--RGFGYQMKQFNDER------LVTVAVG--------LLPLQKCIDETIEYARDRLLFGKT- 331

  Fly   372 SPAEWPVIEYQSQQYRLI---PHLATTIALRVATLWIGKENVDLTMKGFTGEDTSQAGMEIHAIS 433
                  :::.|..|::|.   ..|..|.||...|:.......|::|.      |:.|.::|..::
 Worm   332 ------LLDQQYIQFQLAELEAELEATRALLYRTVLARSRGDDVSML------TAMAKLKIGRLA 384

  Fly   434 SALKPVATWAARDGIQECREACGGHGYLKSSGLGELRND 472
            .|:           ..:|.:..||.|||..:|:.....|
 Worm   385 RAI-----------TDQCLQVWGGAGYLNENGISRAFRD 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox3NP_001137800.1 ACAD 52..694 CDD:447864 97/454 (21%)
acdh-5NP_491942.1 CaiA 66..442 CDD:441563 90/412 (22%)

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