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Protein Alignment CG9527 and Acadl

DIOPT Version :9

Sequence 1:	NP_001137800.1	Gene:	CG9527 / 33898	FlyBaseID:	FBgn0031813	Length:	724	Species:	Drosophila melanogaster
Sequence 2:	NP_031407.2	Gene:	Acadl / 11363	MGIID:	87866	Length:	430	Species:	Mus musculus

Alignment Length:	499	Identity:	106/499 - (21%)
Similarity:	179/499 - (35%)	Gaps:	128/499 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    27 YSG---RREEKAAANIYD--DKRIFPDFRSGPLEEYRE--RASFCYKRMNVVLEGEDHIRLKHKV 84
            :||   |.|..:|..:.|  .:|||    |...:.:||  |..|..:.:....|.|....:..:|
Mouse    29 HSGAEARLETPSAKKLTDIGIRRIF----SSEHDIFRESVRKFFQEEVIPHHTEWEKAGEVSREV 89

  Fly    85 WQ-----------WMEQHPDYQREPGSDLERTREMANKRQHLLWEQQFYGVNEYLGTPHLLLAFG 138
            |:           ..|:|...    |.||..|.        :.||:|
Mouse    90 WEKAGKQGLLGINIAEKHGGI----GGDLLSTA--------VTWEEQ------------------ 124

  Fly   139 QAIFSYDFSTSVKFGLSTGMFPSTLVSNGS-GRLGKYVAKIADNRILGAYALTEISHGTNALGMR 202
                :|...|...|.|.:.:....:.:.|: .::.|::.::...:.:||.|:||...|::..|:|
Mouse   125 ----AYSNCTGPGFSLHSDIVMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVR 185

  Fly   203 TRATYDVKR--QEFIIHTPDFEAAKCWVGNLGKTCTHAIVYAQLYVPDDKHQGLQAFLVPIRDER 265
            |.|    ||  .::|::.........|:.:|  ....|:...:...|   ..|:..|||    |.
Mouse   186 TNA----KRSGSDWILNGSKVFITNGWLSDL--VIVVAVTNREARSP---AHGISLFLV----EN 237

  Fly   266 TLLPFPGVTVGDMGEKIGLNGIDNGFVMFNQYRIPKANLLSKTGDIDAQGNY--TSKIKDERKRL 328
            .:   .|...|....|:|:...|...:.|...|:|...||.:    :.:|.|  ..::..||
Mouse   238 GM---KGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGE----ENKGFYYLMQELPQER--- 292

  Fly   329 GASLGALSVGRVNITAITYVALSKAVTIATR-YAASRRQFGPTNSPAEWPVIEYQSQQYRLI--- 389
                  |.:..:.|:|..::...      || |...|:.||.|       |...|:.|::|.
Mouse   293 ------LLIAELAISACEFMFEE------TRNYVKQRKAFGKT-------VAHIQTVQHKLAELK 338

  Fly   390 PHLATTIALRVATLWIGKENVD--LTMKGFTGEDTSQAGMEIHAISSALKPVATWAARDGIQECR 452
            .|:..|.|.           ||  |.:......|:..|.|..:..|.....||        .||.
Mouse   339 THICVTRAF-----------VDSCLQLHETKRLDSGSASMAKYWASELQNSVA--------YECV 384

  Fly   453 EACGGHGYLKSSGLGELRNDNDANCTYEGENNTLIQQASNWLIS 496
            :..||.||:....:.:...|......|.|.|..:.:..:..::|
Mouse   385 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIVS 428

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.