DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl6 and frma

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:703 Identity:165/703 - (23%)
Similarity:279/703 - (39%) Gaps:151/703 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIACLFIVPICAAPTTQNVEADPNSRLMNNILSYVAEDSSACGTYFQYACGKYAVRHRDDPFTEI 67
            ||..|.:|.:.:.|     :|||                  |..:::.|||.::..|..|.:...
  Fly    10 LIVGLLVVQVKSHP-----QADP------------------CQNFYKVACGNWSASHATDSYESF 51

  Fly    68 IQMLDHKVNGNLVQLMHELHQRSQSPGFNESSVEAKVLHFYRTCREAPPSTRKMEHYLRLAPPGQ 132
            :..||:.....|..|: :..:....|.|.:     ::.:||..||:                   
  Fly    52 MDRLDYNYQEKLADLL-DNEREDDEPHFLQ-----QLRNFYTACRK------------------- 91

  Fly   133 ALTWPQFMPRGEPWPKAQFKWMKSLGHL----------YRYGFTNVL-VNVLVLRSSEN------ 180
                          |.:|.:.::.|.||          ...|.|... :.||:..:..|      
  Fly    92 --------------PLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWK 142

  Fly   181 ---SNRFRLDISMPSLEGDAQHLGGFLSTLATLQIIGVPTKSILPLVRKIRRLESAIRVLTEVDD 242
               |:|...|.:..:.|...:.:  |....|:|..|..|.|..  ..|::..||.  ::::...:
  Fly   143 QLMSHRKHWDPNTTNREPLTREM--FDKLWASLPKIPFPFKEY--YWRELSELEE--KIMSYGSE 201

  Fly   243 DDESETWTLRQWEYKTGYAWQGFVESIVGHSVSHHYVMQAQNAKY-FTGLKRL---MDSTDAEVV 303
            ||                   ||....:...:...::|...|... :..|.::   :|....|.:
  Fly   202 DD-------------------GFDSGDLVTRIPPFWMMPWPNGNITYENLSQMAHWLDIKANEFI 247

  Fly   304 ANYIMTRFVLYLIDDFIDSNE-HID---CVTDMRRNMNLASNLLYKE---RFLDPATLQQYTQEV 361
            ..||..|  |.|:.:.:.:.. |||   |....|:.::..:..|.::   |..:...||.     
  Fly   248 LTYIYMR--LKLVAEGVSTESWHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQD----- 305

  Fly   362 TKVFEQLRRQFLLQINENRLGLTSEQNSMVATKAQHVVLNIGNLPRGRDHRSFV---SRHYEDLV 423
              :|.:|:::|..::..||...|......:..|.:.:.|.:..|||....:|.|   .|||.|:.
  Fly   306 --IFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPRNSSAQSMVRRIERHYRDVH 368

  Fly   424 FPLPDFDYAREHLNLLEFRTRKQVLQL------NQSAPTPDEFFYLSD--PKTAMSSGPY----Y 476
            ....|: :...|:.|...|:.|:..||      .|..|:.   ...||  |......|.|    |
  Fly   369 MNASDY-FGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSR---ISKSDLYPTQVRGYGTYASAFY 429

  Fly   477 LMRLNIIVVPHGLLQEPFFAADSHDIFKYSLLGFVLAHELMHSVDTVGLYYDRYG-NIHEIGPQI 540
            :::.|:::||..||:.||:......|..||.|||:|.|||.|..|:.|:.:..:| ....:..::
  Fly   430 IVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAVDREL 494

  Fly   541 SSSPRFVAGLQCLNRNSTQYLDERIADIAGLDLAYSTYF---QNSSQMSLTDFTTIPPQQIFFLN 602
            ..:|||...|.||.|...:...|:.||.:||:||||.||   |...:.:.:....:..:|.||.|
  Fly   495 DRNPRFQQELGCLRRRFGRKRYEKFADASGLELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHN 559

  Fly   603 LAQFFCGDGDPINFVGHDNDETRLQQMLNGFAPFHEAFGCPAKSNQPEKCQLW 655
            .|||||.|.:.:....|.:|..|:...:..|.||.|||.| ..|.:..:|:|:
  Fly   560 FAQFFCSDKELLQAHDHGSDRKRVNDAVAHFEPFREAFSC-GPSPRRRQCRLY 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 155/660 (23%)
frmaNP_572226.2 GluZincin 25..601 CDD:301352 157/671 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469643
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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