DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl6 and Mme

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_036740.1 Gene:Mme / 24590 RGDID:3098 Length:750 Species:Rattus norvegicus


Alignment Length:735 Identity:164/735 - (22%)
Similarity:271/735 - (36%) Gaps:157/735 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SRLMNNILSYVAEDSSA--CGTYFQYACGKYAVRH---------------RDDPFTEIIQMLDHK 74
            :||:.|:      |:||  |..:|:||||.:..|:               ||:  .|:|      
  Rat    67 ARLIQNM------DASAEPCTDFFKYACGGWLKRNVIPETSSRYSNFDILRDE--LEVI------ 117

  Fly    75 VNGNLVQLMHELHQRSQSPGFNESSVEAKVLHFYRTC-REAPPSTRKMEHYLRLAP-----PGQA 133
                       |....|.|...:.....|....||:| .|:...:|..:..|.|.|     |..:
  Rat   118 -----------LKDVLQEPKTEDIVAVQKAKTLYRSCINESAIDSRGGQPLLTLLPDIYGWPVAS 171

  Fly   134 LTWPQFMPRGEPWPKAQFKWMKSLGHL-YRYGFTNVLVNVLVLRSSENSNRFRLDISMPSL---E 194
            ..|.|  ..|..|...     ||:..| .:|| ..||:|..|....:||.:..:....|.|   .
  Rat   172 QNWEQ--TYGTSWTAE-----KSIAQLNSKYG-KKVLINFFVGTDDKNSTQHIIHFDQPRLGLPS 228

  Fly   195 GDAQHLGG-----------FLSTLATLQIIGVPTKSILPL--------VRKIRRLESAIRVLTEV 240
            .|.....|           |:.::|.|    :..:..||:        :.|:..||..|...|..
  Rat   229 RDYYECTGIYKEACTAYVDFMISVARL----IRQEQRLPIDENQLSLEMNKVMELEKEIANATTK 289

  Fly   241 DDDDES-----ETWTLRQWEYKTG-------YAWQGF---VESIVGHSVSHHYVMQAQNAKYFTG 290
            .:|...     ...||.:.:....       ::|..|   :.|.|..::.:...:.....:|.|.
  Rat   290 PEDRNDPMLLYNKMTLAKLQNNFSLEINGKPFSWSNFTNEIMSTVNINIQNEEEVVVYAPEYLTK 354

  Fly   291 LKRLMDSTDAEVVANYIMTRFVLYLID----DFIDSNEHI---------------DCVTDMRRNM 336
            ||.::.......:.|.:..||::.|:.    ::.:|....               .|...:..||
  Rat   355 LKPILTKYSPRDLQNLMSWRFIMDLVSSLSRNYKESRNAFRKALYGTTSETATWRRCANYVNGNM 419

  Fly   337 NLASNLLYKERFLDPATLQQYTQEVTKVFEQLRRQFLLQINENRLGLTSEQNSMVATKAQHVVLN 401
            ..|...||    ::.|...:....|..:..|:|..| :|..::...:.:|.......||..:...
  Rat   420 ENAVGRLY----VEAAFAGESKHVVEDLIAQIREVF-IQTLDDLTWMDAETKKKAEEKALAIKER 479

  Fly   402 IGNLPRGRDHRSFVSRHYEDLVFPLPDFDYAREHLNLLEFRTRKQVLQLNQSAPTPDEFFYLSDP 466
            ||.......:.:.::..|.:|.:  .:.:|....:..|:|...||:.:|.:.. ..||:.     
  Rat   480 IGYPDDIISNENKLNNEYLELNY--KEEEYFENIIQNLKFSQSKQLKKLREKV-DKDEWI----- 536

  Fly   467 KTAMSSGPYYLMRLNIIVVPHGLLQEPFFAADSHDIFKYSLLGFVLAHELMHSVDTVGLYYDRYG 531
            ..|.....:|....|.||.|.|:||.|||:|...:...|..:|.|:.||:.|..|..|..:::.|
  Rat   537 SGAAVVNAFYSSGRNQIVFPAGILQPPFFSARQSNSLNYGGIGMVIGHEITHGFDDNGRNFNKDG 601

  Fly   532 NIHEIGPQISSSPRFVAGLQCL---------------NRNSTQYLDERIADIAGLD---LAYSTY 578
            ::.:...| .|:..|....||:               :.|....|.|.|||..|:.   .||..|
  Rat   602 DLVDWWTQ-QSANNFKDQSQCMVYQYGNFTWDLAGGQHLNGINTLGENIADNGGIGQAYRAYQNY 665

  Fly   579 FQNSSQMSLTDFTTIPPQQIFFLNLAQFFCGDGDP---INFVG---HDNDETRLQQMLNGFAPFH 637
            .:.:.:..|.....:..:|:||||.||.:||...|   :|.:.   |.....|:...|...|.|.
  Rat   666 VKKNGEEKLLPGLDLNHKQLFFLNFAQVWCGTYRPEYAVNSIKTDVHSPGNFRIIGTLQNSAEFA 730

  Fly   638 EAFGCPAKS--NQPEKCQLW 655
            :||.|...|  |...||::|
  Rat   731 DAFHCRKNSYMNPERKCRVW 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 158/716 (22%)
MmeNP_036740.1 Stop-transfer sequence. /evidence=ECO:0000255 16..23
M13 79..748 CDD:341056 156/713 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.